RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 TMIEQ8NEW7 156 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 LRIG1Q96JA1 1093 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 GDAP1L1Q96MZ0 367 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 PSKH2Q96QS6 385 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 LGMNQ99538 433 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 HEPHQ9BQS7 1158 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 TM6SF2Q9BZW4 377 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 SLC6A17Q9H1V8 727 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 ITM2CQ9NQX7 267 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 USP36Q9P275 1121 aaKnown RBP12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 SAE1Q9UBE0 346 aaPredicted RBP12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 PPM1HQ9ULR3 514 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 PCDHGA2Q9Y5H1 932 aa12.09□□□□□ -0.47
PDLIM5-208ENST00000504489 HACD1B0YJ81 288 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 H0Y858 1186 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 KCNK3O14649 394 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 BNIP3LO60238 219 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 LILRB5O75023 590 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 ZNF217O75362 1048 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 IGSF6O95976 241 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 ADH1BP00325 375 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 IGLV3-19P01714 112 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 PRNPP04156 253 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 ACADMP11310 421 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 CCNB1P14635 433 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 C5AR1P21730 350 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 SLC8A1P32418 973 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 MMP13P45452 471 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 RAD51Q06609 339 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 SFSWAPQ12872 951 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 BYSLQ13895 437 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 NOMO1Q15155 1222 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 CST6Q15828 149 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 MYLK3Q32MK0 819 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 USP39Q53GS9 565 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 MARC1Q5VT66 337 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 FAM46CQ5VWP2 391 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 MMAAQ8IVH4 418 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 CCDC13Q8IYE1 715 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 BBS5Q8N3I7 341 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 TTC13Q8NBP0 860 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 TSEN2Q8NCE0 465 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 CHST14Q8NCH0 376 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 ACTL9Q8TC94 416 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 KCTD12Q96CX2 325 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 CINPQ9BW66 212 aaPredicted RBP12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 CPEB1Q9BZB8 566 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 TPSD1Q9BZJ3 242 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 IL36AQ9UHA7 158 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 AMACRQ9UHK6 382 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 HCN4Q9Y3Q4 1203 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 WASF2Q9Y6W5 498 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 PLXNA2O75051 1894 aa12.08□□□□□ -0.48
PDLIM5-208ENST00000504489 C1QTNF3-AMACRE9PGA6 284 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 ENC1O14682 589 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 MTSS1O43312 755 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 IL1BP01584 269 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 DNTTP04053 509 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 CTSLP07711 333 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 P2RY2P41231 377 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 TPMTP51580 245 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 IFI35P80217 286 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 OTUD4Q01804 1114 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 AP1B1Q10567 949 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 ZNF235Q14590 738 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 GRM3Q14832 879 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 PRKD1Q15139 912 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 MAP7D1Q3KQU3 841 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 TTC31Q49AM3 519 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 RALGPS1Q5JS13 557 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 ATXN7L2Q5T6C5 722 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 ZC3H14Q6PJT7 736 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 USP30Q70CQ3 517 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 SRLQ86TD4 932 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 SLC13A5Q86YT5 568 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 RYBPQ8N488 228 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 PIP4K2CQ8TBX8 421 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 TFB1MQ8WVM0 346 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 GAB3Q8WWW8 586 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 VOPP1Q96AW1 172 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 HAUS1Q96CS2 278 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 PBKQ96KB5 322 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 IL12RB2Q99665 862 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 MGME1Q9BQP7 344 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 OSBPL1AQ9BXW6 950 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 PABPC3Q9H361 631 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 HAUS2Q9NVX0 235 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 RBM22Q9NW64 420 aaKnown RBP eCLIP12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 SARDHQ9UL12 918 aa12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 ARIH1Q9Y4X5 557 aaPredicted RBP12.07□□□□□ -0.48
PDLIM5-208ENST00000504489 TCRBV7S2A1N4TA0A589 114 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 GOLGA8CPA6NN73 597 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 KCNK1O00180 336 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 KRIT1O00522 736 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 MUSKO15146 869 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 MID1O15344 667 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 LEFTY1O75610 366 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 RPP40O75818 363 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 ATP1A1P05023 1023 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 CR2P20023 1033 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms