RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 L1CAMP32004 1257 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 RFC1P35251 1148 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 VAMP7P51809 220 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 GALK2Q01415 458 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 POU6F1Q14863 301 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 TRIM16LQ309B1 348 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 JADE1Q6IE81 842 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 CHRDL2Q6WN34 429 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 FRA10AC1Q70Z53 315 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 DPH6Q7L8W6 267 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 ADGRG6Q86SQ4 1221 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 CHPFQ8IZ52 775 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 URGCPQ8TCY9 931 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 SLC9A6Q92581 669 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 SLC35C1Q96A29 364 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 CNOT6LQ96LI5 555 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 CDRT15Q96T59 188 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 RAD9AQ99638 391 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 MROQ9BYG7 248 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 RHOBTB2Q9BYZ6 727 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 MKRN2Q9H000 416 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 TRIT1Q9H3H1 467 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 NARFLQ9H6Q4 476 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 LIN28AQ9H9Z2 209 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 MRM3Q9HC36 420 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 INTS7Q9NVH2 962 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 CPNE7Q9UBL6 633 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 ARMCX3Q9UH62 379 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 LAMP5Q9UJQ1 280 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 PADI4Q9UM07 663 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 UBQLN1Q9UMX0 589 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 EDARQ9UNE0 448 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 MAPRE3Q9UPY8 281 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 VWA7Q9Y334 891 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 INSL6Q9Y581 213 aa9.75□□□□□ -0.85
PDLIM5-207ENST00000503974 NLRC5Q86WI3 1866 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 C1orf232A0A0U1RR37 186 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 TAF4O00268 1085 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 KPNA5O15131 536 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 GSC2O15499 205 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 B4GALT3O60512 393 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 THP07101 528 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 KRT7P08729 469 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 THRAP10827 490 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 GFAPP14136 432 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 LRPAP1P30533 357 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 HARS2P49590 506 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 RPP38P78345 283 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 DLG4P78352 724 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 CDR2Q01850 454 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 CREB5Q02930 508 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 TMEM132DQ14C87 1099 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 GLRA4Q5JXX5 417 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 PRPF38BQ5VTL8 546 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 FAM109BQ6ICB4 259 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 C15orf39Q6ZRI6 1047 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 TMC3Q7Z5M5 1100 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 PM20D2Q8IYS1 436 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 ABI1Q8IZP0 508 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 TCAIMQ8N3R3 496 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 MARVELD2Q8N4S9 558 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 CCDC33Q8N5R6 958 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 RFWD2Q8NHY2 731 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 KBTBD7Q8WVZ9 684 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 C7orf26Q96N11 449 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 LRRC37BQ96QE4 947 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 RANBP9Q96S59 729 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 CDK5RAP1Q96SZ6 601 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 C17orf62Q9BQA9 187 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 CWH43Q9H720 699 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 SAR1AQ9NR31 198 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 NDE1Q9NXR1 346 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 EVLQ9UI08 416 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 NUP50Q9UKX7 468 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 CDH7Q9ULB5 785 aa9.74□□□□□ -0.85
PDLIM5-207ENST00000503974 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 GRID2IPA4D2P6 1211 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 GRXCR2A6NFK2 248 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 PMM2O15305 246 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 RAD51CO43502 376 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 PIGNO95427 931 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 RARGP13631 454 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 KRT13P13646 458 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 TPTEP56180 551 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 SOX4Q06945 474 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 SPAG1Q07617 926 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 DLG1Q12959 904 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 TUSC3Q13454 348 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 RAPGEF1Q13905 1077 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 DUSP7Q16829 419 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 SFT2D3Q587I9 215 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 TNFAIP8L3Q5GJ75 292 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 HP1BP3Q5SSJ5 553 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 C6orf163Q5TEZ5 329 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 COLGALT2Q8IYK4 626 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 CCDC116Q8IYX3 515 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 ENKURQ8TC29 256 aa9.73□□□□□ -0.85
PDLIM5-207ENST00000503974 CKAP2Q8WWK9 683 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms