RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 PEX6Q13608 980 aa17.39■□□□□ 0.38
HMGXB3-201ENST00000502717 GK5Q6ZS86 529 aa17.39■□□□□ 0.38
HMGXB3-201ENST00000502717 SZRD1Q7Z422 152 aa17.39■□□□□ 0.38
HMGXB3-201ENST00000502717 PNPT1Q8TCS8 783 aaKnown RBP17.39■□□□□ 0.38
HMGXB3-201ENST00000502717 CD101Q93033 1021 aa17.39■□□□□ 0.38
HMGXB3-201ENST00000502717 DPY30Q9C005 99 aa17.39■□□□□ 0.38
HMGXB3-201ENST00000502717 ENTPD7Q9NQZ7 604 aa17.39■□□□□ 0.38
HMGXB3-201ENST00000502717 CACNA2D2Q9NY47 1150 aa17.39■□□□□ 0.38
HMGXB3-201ENST00000502717 DKK3Q9UBP4 350 aa17.39■□□□□ 0.38
HMGXB3-201ENST00000502717 TMA7Q9Y2S6 64 aaKnown RBP17.39■□□□□ 0.38
HMGXB3-201ENST00000502717 CCDC189A1A4V9 331 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 LACTBL1A8MY62 500 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 AREL1O15033 823 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 DDX5P17844 614 aaKnown RBP17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 AARS2Q5JTZ9 985 aaKnown RBP17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 ADGRG6Q86SQ4 1221 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 PLD5Q8N7P1 536 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 ANKRD52Q8NB46 1076 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 OR56A4Q8NGH8 313 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 DNAJB14Q8TBM8 379 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 OMDQ99983 421 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 CHID1Q9BWS9 393 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 APOL5Q9BWW9 433 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 C2orf81A6NN90 581 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 FAM25AB3EWG3 89 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 FAM25CB3EWG5 89 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 FAM25GB3EWG6 89 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 TMEM63AO94886 807 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 COL6A2P12110 1019 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 LSAMPQ13449 338 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 SFT2D3Q587I9 215 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 LRTOMTQ8WZ04 291 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 OLFM1Q99784 485 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 COQ10BQ9H8M1 238 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 RECQL5O94762 991 aaPredicted RBP17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 PARNO95453 639 aaKnown RBP17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 CYBBP04839 570 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 SLC2A3P11169 496 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 ITGA7Q13683 1181 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 TIMM50Q3ZCQ8 353 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 SLCO6A1Q86UG4 719 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 KRT73Q86Y46 540 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 ZHX1-C8orf76Q96EF9 292 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 OTUB1Q96FW1 271 aaPredicted RBP17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 DYRK4Q9NR20 520 aa17.39■□□□□ 0.37
HMGXB3-201ENST00000502717 TRIM43BA6NCK2 446 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 DLDP09622 509 aaKnown RBP17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 ABL2P42684 1182 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 ADGRF2Q8IZF7 708 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 TMEM169Q96HH4 297 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 TRMOQ9BU70 441 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 PRDM12Q9H4Q4 367 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 LSM1O15116 133 aaKnown RBP17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 CAPN15O75808 1086 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 TKTL1P51854 596 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 GDF10P55107 478 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 GPX6P59796 221 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 PURAQ00577 322 aaKnown RBP17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 NOGQ13253 232 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 TJAP1Q5JTD0 557 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 CBR4Q8N4T8 237 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 CELF6Q96J87 481 aaKnown RBP17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 ROGDIQ9GZN7 287 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 TRIM45Q9H8W5 580 aaPredicted RBP17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 SMPD3Q9NY59 655 aaPredicted RBP17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 EGFL7Q9UHF1 273 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 GPC6Q9Y625 555 aaPredicted RBP17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 CLDN25C9JDP6 229 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 PLA2G6O60733 806 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 CCDC142Q17RM4 750 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 LSM12Q3MHD2 195 aaKnown RBP17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 RHBDF2Q6PJF5 856 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 ZNF781Q8N8C0 355 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 C19orf18Q8NEA5 215 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 SENP6Q9GZR1 1112 aaPredicted RBP17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 TTLL13PA6NNM8 815 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 H3BSA7 217 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 SLC2A4P14672 509 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 ITGAXP20702 1163 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 MAPRE1Q15691 268 aaKnown RBP17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 RFX4Q33E94 735 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 CRTC3Q6UUV7 619 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 PGBD3Q8N328 593 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 TTC30BQ8N4P2 665 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 NUAK2Q9H093 628 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 RHOJQ9H4E5 214 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 LSM7Q9UK45 103 aaKnown RBP17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 PCDHGC3Q9UN70 934 aa17.38■□□□□ 0.37
HMGXB3-201ENST00000502717 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 SNPHO15079 494 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 HNRNPLP14866 589 aaKnown RBP eCLIP17.37■□□□□ 0.374e-6■□□□□ 11
HMGXB3-201ENST00000502717 HARS2P49590 506 aaKnown RBP17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 ADIGQ0VDE8 80 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 PSMD5Q16401 504 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 ZNF410Q86VK4 478 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 LZTR1Q8N653 840 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 FAM136AQ96C01 138 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 LGMNQ99538 433 aa17.37■□□□□ 0.37
HMGXB3-201ENST00000502717 SETD4Q9NVD3 440 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms