RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 LRRC73Q5JTD7 316 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 ANKRD40Q6AI12 368 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 KIAA1161Q6NSJ0 714 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 PARS2Q7L3T8 475 aaKnown RBP9.3□□□□□ -0.92
CCDC171-209ENST00000498725 RD3Q7Z3Z2 195 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 TFAP2DQ7Z6R9 452 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 VPS36Q86VN1 386 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 RYBPQ8N488 228 aaPredicted RBP9.3□□□□□ -0.92
CCDC171-209ENST00000498725 Q8N9G6 341 aaPredicted RBP9.3□□□□□ -0.92
CCDC171-209ENST00000498725 ZSCAN1Q8NBB4 408 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 KYQ8NBH2 561 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 OR7D4Q8NG98 312 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 OR6K2Q8NGY2 324 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 FAM174AQ8TBP5 190 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 BTN2A2Q8WVV5 523 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 NAT6Q93015 286 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 SLC35C1Q96A29 364 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 LIN37Q96GY3 246 aaPredicted RBP9.3□□□□□ -0.92
CCDC171-209ENST00000498725 SPON2Q9BUD6 331 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 LRRC61Q9BV99 259 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 C2orf49Q9BVC5 232 aaPredicted RBP9.3□□□□□ -0.92
CCDC171-209ENST00000498725 TRIM62Q9BVG3 475 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 HDAC8Q9BY41 377 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 SLC13A1Q9BZW2 595 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 STRADBQ9C0K7 418 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 CLPBQ9H078 707 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 THAP9Q9H5L6 903 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 GPR27Q9NS67 375 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 SEPT10Q9P0V9 454 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 ARMCX3Q9UH62 379 aaPredicted RBP9.3□□□□□ -0.92
CCDC171-209ENST00000498725 PNMA8BQ9ULN7 279 aaPredicted RBP9.3□□□□□ -0.92
CCDC171-209ENST00000498725 HPSEQ9Y251 543 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 HS3ST2Q9Y278 367 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 PCDHGA4Q9Y5G9 962 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 FADS3Q9Y5Q0 445 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 ACTL7AQ9Y615 435 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 WASF2Q9Y6W5 498 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 DOCK4Q8N1I0 1966 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 A0A0D9SEW6 157 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 D6RAR5 112 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 TPP1O14773 563 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 SLC16A3O15427 465 aaKnown RBP9.29□□□□□ -0.92
CCDC171-209ENST00000498725 THAP12O43422 761 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 ITGB2P05107 769 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 HSP90AA1P07900 732 aaKnown RBP9.29□□□□□ -0.92
CCDC171-209ENST00000498725 LIPCP11150 499 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 GP1BBP13224 206 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 L1CAMP32004 1257 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 ETV5P41161 510 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 MLLT3P42568 568 aaPredicted RBP9.29□□□□□ -0.92
CCDC171-209ENST00000498725 ABL2P42684 1182 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 PMS1P54277 932 aaKnown RBP9.29□□□□□ -0.92
CCDC171-209ENST00000498725 CDH4P55283 916 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 MCCD1P59942 119 aaPredicted RBP9.29□□□□□ -0.92
CCDC171-209ENST00000498725 CCDC40Q4G0X9 1142 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 HIST2H2BCQ6DN03 193 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 KRBA2Q6ZNG9 492 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 HID1Q8IV36 788 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 PCDH19Q8TAB3 1148 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 WDR48Q8TAF3 677 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 HTR3CQ8WXA8 447 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 SPATA32Q96LK8 384 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 MED15Q96RN5 788 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 KLF6Q99612 283 aaPredicted RBP9.29□□□□□ -0.92
CCDC171-209ENST00000498725 SLC4A5Q9BY07 1137 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 GTPBP4Q9BZE4 634 aaKnown RBP9.29□□□□□ -0.92
CCDC171-209ENST00000498725 TM6SF2Q9BZW4 377 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 METTL14Q9HCE5 456 aaKnown RBP9.29□□□□□ -0.92
CCDC171-209ENST00000498725 ACP6Q9NPH0 428 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 TMPRSS4Q9NRS4 437 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 MPP6Q9NZW5 540 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 LOXL2Q9Y4K0 774 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 PAXBP1Q9Y5B6 917 aa9.29□□□□□ -0.92
CCDC171-209ENST00000498725 UTP20O75691 2785 aaKnown RBP9.29□□□□□ -0.92
CCDC171-209ENST00000498725 A0A1W2PQM1 296 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 LMO7DNF2Z398 122 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 M0QYT0 321 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 NTN3O00634 580 aaPredicted RBP9.28□□□□□ -0.92
CCDC171-209ENST00000498725 SFTPCP11686 197 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 CTSEP14091 401 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 ITGB7P26010 798 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 IGFALSP35858 605 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 EIF4A3P38919 411 aaKnown RBP9.28□□□□□ -0.92
CCDC171-209ENST00000498725 USP8P40818 1118 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 RPL34P49207 117 aaKnown RBP9.28□□□□□ -0.92
CCDC171-209ENST00000498725 CCNHP51946 323 aaPredicted RBP9.28□□□□□ -0.92
CCDC171-209ENST00000498725 PNOCQ13519 176 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 PTK2BQ14289 1009 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 XKR5Q6UX68 686 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 LEKR1Q6ZMV7 388 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 NYAP1Q6ZVC0 841 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 BEND5Q7L4P6 421 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 PASD1Q8IV76 773 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 USP7Q93009 1102 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 TSACCQ96A04 125 aaPredicted RBP9.28□□□□□ -0.92
CCDC171-209ENST00000498725 KREMEN1Q96MU8 473 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 HEPHQ9BQS7 1158 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 C1QTNF2Q9BXJ5 285 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 SLC25A18Q9H1K4 315 aa9.28□□□□□ -0.92
CCDC171-209ENST00000498725 EPN3Q9H201 632 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms