RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	AGBL4	Q5VU57	503 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	FBXL19	Q6PCT2	694 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	TMCO3	Q6UWJ1	677 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	POLN	Q7Z5Q5	900 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	ADAT2	Q7Z6V5	191 aa	Known RBP	10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	TRIM69	Q86WT6	500 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	CCDC170	Q8IYT3	715 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	MINDY1	Q8N5J2	469 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	CHST14	Q8NCH0	376 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	C1orf216	Q8TAB5	229 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	GRIN3A	Q8TCU5	1115 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	HSPH1	Q92598	858 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	RAB7B	Q96AH8	199 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	ARHGEF26	Q96DR7	871 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	CHP1	Q99653	195 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	TM6SF2	Q9BZW4	377 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	SLC32A1	Q9H598	525 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	TM9SF3	Q9HD45	589 aa		10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	DNAAF2	Q9NVR5	837 aa	Known RBP	10.69	□□□□□ -0.7
FXR1-222	ENST00000498658	DCDC2B	A2VCK2	349 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	C10orf142	B7Z368	130 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	KRIT1	O00522	736 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	VILL	O15195	856 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	PRAMEF11	O60813	436 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	RNGTT	O60942	597 aa	Known RBP	10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	ZNF883	P0CG24	379 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	CSRP1	P21291	193 aa	Known RBP	10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	IL1R2	P27930	398 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	PAPOLA	P51003	745 aa	Known RBP	10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	SUOX	P51687	545 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	ZNF75D	P51815	510 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	C21orf59	P57076	290 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	SLC25A11	Q02978	314 aa	Known RBP	10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	IL10RB	Q08334	325 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	OVGP1	Q12889	678 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	SUZ12	Q15022	739 aa	Known RBP	10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	PDK2	Q15119	407 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	SMTNL2	Q2TAL5	461 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	UAP1L1	Q3KQV9	507 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	POM121L1P	Q3SYA9	428 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	ZNF805	Q5CZA5	627 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	PIP5KL1	Q5T9C9	394 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	AFMID	Q63HM1	303 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	LRRC49	Q8IUZ0	686 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	KCTD6	Q8NC69	237 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	HCAR2	Q8TDS4	363 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	NSMCE1	Q8WV22	266 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	BTBD6	Q96KE9	485 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	ZNF599	Q96NL3	588 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	CSPG4P5	Q96PW8	444 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	SLC39A8	Q9C0K1	460 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	RBSN	Q9H1K0	784 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	ZDHHC6	Q9H6R6	413 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	SP110	Q9HB58	689 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	PDF	Q9HBH1	243 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	HAUS2	Q9NVX0	235 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	MFHAS1	Q9Y4C4	1052 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	WASF2	Q9Y6W5	498 aa		10.68	□□□□□ -0.7
FXR1-222	ENST00000498658	PCDH15	Q96QU1	1955 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	PRAMEF26	H0Y7S4	382 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	DFFA	O00273	331 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	TSPAN6	O43657	245 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	AP1G1	O43747	822 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	PALM	O75781	387 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	MTA2	O94776	668 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	IPO7	O95373	1038 aa	Known RBP	10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	CEACAM1	P13688	526 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	ADRB3	P13945	408 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	CD38	P28907	300 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	CYLC1	P35663	651 aa	Predicted RBP	10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	SLC1A1	P43005	524 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	CSNK1E	P49674	416 aa	Known RBP	10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	RENBP	P51606	427 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	CDH6	P55285	790 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	RPS21	P63220	83 aa	Known RBP	10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	NSUN2	Q08J23	767 aa	Known RBP eCLIP	10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	TCEAL1	Q15170	157 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	SPA17	Q15506	151 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	PPM1J	Q5JR12	505 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	NAPEPLD	Q6IQ20	393 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	KIAA1161	Q6NSJ0	714 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	GDPD4	Q6W3E5	623 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	IQCH	Q86VS3	1027 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	HORMAD1	Q86X24	394 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	BBS5	Q8N3I7	341 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	TC2N	Q8N9U0	490 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	SLC35G2	Q8TBE7	412 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	FAM174A	Q8TBP5	190 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	FAM71B	Q8TC56	605 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	RFFL	Q8WZ73	363 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	ARRDC3	Q96B67	414 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	CELF6	Q96J87	481 aa	Known RBP	10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	FEM1C	Q96JP0	617 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	SERAC1	Q96JX3	654 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	CALR3	Q96L12	384 aa	Known RBP	10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	ZNF641	Q96N77	438 aa	Predicted RBP	10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	PANX2	Q96RD6	677 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	TUBGCP5	Q96RT8	1024 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	ORAI3	Q9BRQ5	295 aa		10.67	□□□□□ -0.7
FXR1-222	ENST00000498658	ZNF670	Q9BS34	389 aa		10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms