RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 ATP2C2O75185 946 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 TOM1L1O75674 476 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 SMNDC1O75940 238 aaKnown RBP eCLIP5.36□□□□□ -1.55
FXN-205ENST00000498653 NOL4O94818 638 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 FGFR1OPO95684 399 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 HDCP19113 662 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 GARTP22102 1010 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 LORP23490 312 aaPredicted RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 RPL13P26373 211 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 HOXD13P35453 343 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 RABIFP47224 123 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 ZNF165P49910 485 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 TPM4P67936 248 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 LRRC63Q05C16 580 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 Q0VFX4 171 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 CDSNQ15517 529 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 EDRF1Q3B7T1 1238 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 SEZ6Q53EL9 994 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 SDHAF4Q5VUM1 108 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 SPATA1Q5VX52 437 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 BTBD8Q5XKL5 378 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 ANKRD40Q6AI12 368 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 SLFN12LQ6IEE8 588 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 ARMCX5Q6P1M9 558 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 NCEH1Q6PIU2 408 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 FOXR2Q6PJQ5 311 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 MRGPRGQ86SM5 289 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 TMEM135Q86UB9 458 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 TMEM25Q86YD3 366 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 TMEM130Q8N3G9 435 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 ZNF808Q8N4W9 903 aaPredicted RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 CISD2Q8N5K1 135 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 AOPEPQ8N6M6 819 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 RBMXL3Q8N7X1 1067 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 UBR7Q8N806 425 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 OR2T3Q8NH03 318 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 ZNF417Q8TAU3 575 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 ENOX1Q8TC92 643 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 NOC3LQ8WTT2 800 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 UBE2Q2Q8WVN8 375 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 ALKBH8Q96BT7 664 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 TRMT2BQ96GJ1 504 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 PPP1R13BQ96KQ4 1090 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 MYRFLQ96LU7 910 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 ZMAT2Q96NC0 199 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 ZNF587Q96SQ5 575 aaPredicted RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 ACO2Q99798 780 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 SPOCK3Q9BQ16 436 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 BPIFA3Q9BQP9 254 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 ADPGKQ9BRR6 497 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 TCHPQ9BT92 498 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 MSTO1Q9BUK6 570 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 MENTQ9BUN1 341 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 DUSP23Q9BVJ7 150 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 INTS2Q9H0H0 1204 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 KCTD10Q9H3F6 313 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 RPF1Q9H9Y2 349 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 SPHK2Q9NRA0 654 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 AGPAT3Q9NRZ7 376 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 NOP53Q9NZM5 478 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 SERGEFQ9UGK8 458 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 GGT7Q9UJ14 662 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 TRAF3IP3Q9Y228 551 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 TNFSF13BQ9Y275 285 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 PCDHGB7Q9Y5F8 929 aa5.36□□□□□ -1.55
FXN-205ENST00000498653 MRPS18BQ9Y676 258 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 NYNRINQ9P2P1 1898 aaKnown RBP5.36□□□□□ -1.55
FXN-205ENST00000498653 UNC13CQ8NB66 2214 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 A0A1W2PQM1 296 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 TRIM49BA6NDI0 452 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 FAM47DPA6NHR8 397 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 GOLGA6L19H0YKK7 550 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 GNB5O14775 395 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 IKBKBO14920 756 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 MUSKO15146 869 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 FANCGO15287 622 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 CLDN3O15551 220 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 EXOC3O60645 756 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 CPNE3O75131 537 aaKnown RBP5.35□□□□□ -1.55
FXN-205ENST00000498653 ALX3O95076 343 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 OLFM2O95897 454 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 LDHAP00338 332 aaKnown RBP5.35□□□□□ -1.55
FXN-205ENST00000498653 NR3C1P04150 777 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 EDN1P05305 212 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 CISD3P0C7P0 127 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 MCF2P10911 925 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 HARSP12081 509 aaKnown RBP5.35□□□□□ -1.55
FXN-205ENST00000498653 TCN2P20062 427 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 ACO1P21399 889 aaKnown RBP5.35□□□□□ -1.55
FXN-205ENST00000498653 NR2F2P24468 414 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 HNRNPH3P31942 346 aaKnown RBP5.35□□□□□ -1.55
FXN-205ENST00000498653 CYP2J2P51589 502 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 PMS1P54277 932 aaKnown RBP5.35□□□□□ -1.55
FXN-205ENST00000498653 GALCP54803 685 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 SLC7A9P82251 487 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 FKBP3Q00688 224 aaKnown RBP5.35□□□□□ -1.55
FXN-205ENST00000498653 MYL5Q02045 173 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 MCL1Q07820 350 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 PTK2BQ14289 1009 aa5.35□□□□□ -1.55
FXN-205ENST00000498653 NFIL3Q16649 462 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms