RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 SAMD11Q96NU1 681 aa18.04■□□□□ 0.48
CHRNA4-206ENST00000498043 ZFATQ9P243 1243 aa18.04■□□□□ 0.48
CHRNA4-206ENST00000498043 FAM47DPA6NHR8 397 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 TRIM49D1C9J1S8 452 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 SNAP91O60641 907 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 KRT37O76014 449 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 MT-ND3P03897 115 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 HNRNPA1P09651 372 aaKnown RBP eCLIP18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 PFKLP17858 780 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 ARF5P84085 180 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 MGAT5Q09328 741 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 ARHGAP15Q53QZ3 475 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 LINGO4Q6UY18 593 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 TAX1BP1Q86VP1 789 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 MFN1Q8IWA4 741 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 BBS5Q8N3I7 341 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 GDAP1Q8TB36 358 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 DYDC1Q8WWB3 177 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 SERAC1Q96JX3 654 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 NKIRAS1Q9NYS0 192 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 SEPT3Q9UH03 358 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 VPS28Q9UK41 221 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 ZNF510Q9Y2H8 683 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 PSAT1Q9Y617 370 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 GBP2P32456 591 aaPredicted RBP18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 CSKP41240 450 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 RGRP47804 291 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 SEPT6Q14141 434 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 RNF135Q8IUD6 432 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 PPHLN1Q8NEY8 458 aaKnown RBP18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 ING5Q8WYH8 240 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 CENPTQ96BT3 561 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 MGME1Q9BQP7 344 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 FAM107BQ9H098 131 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 FAM169AQ9Y6X4 670 aa18.03■□□□□ 0.48
CHRNA4-206ENST00000498043 CCDC195A0A1B0GUA6 201 aa18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 MAGEB16A2A368 324 aa18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 PRPF4O43172 522 aaKnown RBP eCLIP18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 PRAMEF12O95522 483 aa18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 F7P08709 466 aaPredicted RBP18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 CA4P22748 312 aa18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 PCID2Q5JVF3 399 aa18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 PDE12Q6L8Q7 609 aaKnown RBP18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 ZNF783Q6ZMS7 281 aa18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 CPXM2Q8N436 756 aa18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 BCAS4Q8TDM0 211 aa18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 GDPD5Q8WTR4 605 aa18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 TADA1Q96BN2 335 aa18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 PSKH2Q96QS6 385 aa18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 KIFC1Q9BW19 673 aa18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 PBX4Q9BYU1 374 aa18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 EPN3Q9H201 632 aa18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 TASP1Q9H6P5 420 aa18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 SMG5Q9UPR3 1016 aaKnown RBP18.02■□□□□ 0.48
CHRNA4-206ENST00000498043 CEP290O15078 2479 aa18.02■□□□□ 0.47
CHRNA4-206ENST00000498043 KRT38O76015 456 aa18.02■□□□□ 0.47
CHRNA4-206ENST00000498043 SNRPAP09012 282 aaKnown RBP18.02■□□□□ 0.47
CHRNA4-206ENST00000498043 DDX6P26196 483 aaKnown RBP eCLIP18.02■□□□□ 0.47
CHRNA4-206ENST00000498043 RPA3P35244 121 aaPredicted RBP18.02■□□□□ 0.47
CHRNA4-206ENST00000498043 SLC1A5Q15758 541 aa18.02■□□□□ 0.47
CHRNA4-206ENST00000498043 PRSS36Q5K4E3 855 aa18.02■□□□□ 0.47
CHRNA4-206ENST00000498043 MROH9Q5TGP6 573 aa18.02■□□□□ 0.47
CHRNA4-206ENST00000498043 PACS1Q6VY07 963 aa18.02■□□□□ 0.47
CHRNA4-206ENST00000498043 KCNMB4Q86W47 210 aa18.02■□□□□ 0.47
CHRNA4-206ENST00000498043 USP13Q92995 863 aaPredicted RBP18.02■□□□□ 0.47
CHRNA4-206ENST00000498043 ZNF707Q96C28 371 aaPredicted RBP18.02■□□□□ 0.47
CHRNA4-206ENST00000498043 FEM1AQ9BSK4 669 aa18.02■□□□□ 0.47
CHRNA4-206ENST00000498043 C20orf96Q9NUD7 363 aaPredicted RBP18.02■□□□□ 0.47
CHRNA4-206ENST00000498043 ZDHHC7Q9NXF8 308 aa18.02■□□□□ 0.47
CHRNA4-206ENST00000498043 TCAF1Q9Y4C2 921 aa18.02■□□□□ 0.47
CHRNA4-206ENST00000498043 TYROBPO43914 113 aa18.01■□□□□ 0.47
CHRNA4-206ENST00000498043 NAB1Q13506 487 aa18.01■□□□□ 0.47
CHRNA4-206ENST00000498043 RFTN1Q14699 578 aaPredicted RBP18.01■□□□□ 0.47
CHRNA4-206ENST00000498043 SIRPB2Q5JXA9 342 aa18.01■□□□□ 0.47
CHRNA4-206ENST00000498043 ALG1LQ6GMV1 187 aa18.01■□□□□ 0.47
CHRNA4-206ENST00000498043 PKN3Q6P5Z2 889 aa18.01■□□□□ 0.47
CHRNA4-206ENST00000498043 POTEHQ6S545 545 aa18.01■□□□□ 0.47
CHRNA4-206ENST00000498043 PRKD2Q9BZL6 878 aa18.01■□□□□ 0.47
CHRNA4-206ENST00000498043 NKX2-4Q9H2Z4 354 aa18.01■□□□□ 0.47
CHRNA4-206ENST00000498043 HAUS2Q9NVX0 235 aa18.01■□□□□ 0.47
CHRNA4-206ENST00000498043 TXNDC16Q9P2K2 825 aa18.01■□□□□ 0.47
CHRNA4-206ENST00000498043 CLEC4EQ9ULY5 219 aa18.01■□□□□ 0.47
CHRNA4-206ENST00000498043 HMX2A2RU54 273 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 GOLGA8TH3BQL2 631 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 TMCC1O94876 653 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 PYGBP11216 843 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 CEBPBP17676 345 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 SERPINH1P50454 418 aaKnown RBP18■□□□□ 0.47
CHRNA4-206ENST00000498043 MPPE1Q53F39 396 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 HSP90AA5PQ58FG0 334 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 LGSNQ5TDP6 509 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 CCDC117Q8IWD4 279 aaPredicted RBP18■□□□□ 0.47
CHRNA4-206ENST00000498043 C12orf76Q8N812 135 aaPredicted RBP18■□□□□ 0.47
CHRNA4-206ENST00000498043 LEMD2Q8NC56 503 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 IFT43Q96FT9 208 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 AGAP2Q99490 1192 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 PAIP2Q9BPZ3 127 aaKnown RBP18■□□□□ 0.47
CHRNA4-206ENST00000498043 ARNT2Q9HBZ2 717 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 NOD2Q9HC29 1040 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 TDP1Q9NUW8 608 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms