RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 PHLPP1O60346 1717 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 SHANK3Q9BYB0 1731 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 IL10P22301 178 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 FASP25445 335 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 GNL1P36915 607 aaPredicted RBP13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 CRTC3Q6UUV7 619 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 FRA10AC1Q70Z53 315 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 EPHX4Q8IUS5 362 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 TERB1Q8NA31 727 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 SLC7A3Q8WY07 619 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 SEPHS2Q99611 448 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 CGREF1Q99674 301 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 NIF3L1Q9GZT8 377 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 HAPLN2Q9GZV7 340 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 SPC25Q9HBM1 224 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 SUCOQ9UBS9 1254 aaKnown RBP13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 MOSPD1Q9UJG1 213 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 TAF4O00268 1085 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 INPP4BO15327 924 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 MYF6P23409 242 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 HSD17B4P51659 736 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 PPP1R3AQ16821 1122 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 SLC27A3Q5K4L6 730 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 DDIASQ8IXT1 998 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 PSMA8Q8TAA3 256 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 SH3YL1Q96HL8 342 aaPredicted RBP13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 CTRCQ99895 268 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 LHPPQ9H008 270 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 KLHL3Q9UH77 587 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 IPO11Q9UI26 975 aaKnown RBP13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 USP21Q9UK80 565 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 MFHAS1Q9Y4C4 1052 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 SLC30A1Q9Y6M5 507 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 DHRS12A0PJE2 317 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 TADA2AO75478 443 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 GPD1P21695 349 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 COPZ1P61923 177 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 PRKAA1Q13131 559 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 CAPRIN1Q14444 709 aaKnown RBP13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 ZNF460Q14592 562 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 FAM117BQ6P1L5 589 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 ERMP1Q7Z2K6 904 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 FAM35AQ86V20 835 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 CDKL3Q8IVW4 592 aaPredicted RBP13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 C4orf19Q8IY42 314 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 CNTD1Q8N815 330 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 OR2T34Q8NGX1 318 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 OR2T3Q8NH03 318 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 URGCPQ8TCY9 931 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 KCTD4Q8WVF5 259 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 LGMNQ99538 433 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 CGRRF1Q99675 332 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 MROQ9BYG7 248 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 CACNA2D2Q9NY47 1150 aa13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.22□□□□□ -0.29
GAPVD1-220ENST00000497580 POLRMTO00411 1230 aaKnown RBP13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 SPRP35270 261 aaPredicted RBP13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 STX5Q13190 355 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 UBE2UQ5VVX9 321 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 RNF135Q8IUD6 432 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 SEPT8Q92599 483 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 CERS2Q96G23 380 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 OTUD5Q96G74 571 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 CENPOQ9BU64 300 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 ITM2CQ9NQX7 267 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 DKK3Q9UBP4 350 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 VPS28Q9UK41 221 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 PTBP2Q9UKA9 531 aaKnown RBP13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 RUVBL2Q9Y230 463 aaKnown RBP13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 TIMM22Q9Y584 194 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 PTGES3LE9PB15 166 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 GABBR2O75899 941 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 MFN2O95140 757 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 IL7RP16871 459 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 TSPAN8P19075 237 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 CASP2P42575 452 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 PLK1P53350 603 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 NIPAL4Q0D2K0 466 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 AKAP14Q86UN6 197 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 COLGALT1Q8NBJ5 622 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 PSD4Q8NDX1 1056 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 MCUQ8NE86 351 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 ZNF347Q96SE7 839 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 ZBED2Q9BTP6 218 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 VPS33BQ9H267 617 aa13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 DDX28Q9NUL7 540 aaKnown RBP13.21□□□□□ -0.29
GAPVD1-220ENST00000497580 SYNJ2BP-COX16A0A087WUM0 186 aa13.21□□□□□ -0.3
GAPVD1-220ENST00000497580 H0YJX3 145 aa13.21□□□□□ -0.3
GAPVD1-220ENST00000497580 CYP2F1P24903 491 aa13.21□□□□□ -0.3
GAPVD1-220ENST00000497580 IFITM3Q01628 133 aa13.21□□□□□ -0.3
GAPVD1-220ENST00000497580 KIF19Q2TAC6 998 aa13.21□□□□□ -0.3
GAPVD1-220ENST00000497580 STXBP5Q5T5C0 1151 aa13.21□□□□□ -0.3
GAPVD1-220ENST00000497580 ATAD3BQ5T9A4 648 aa13.21□□□□□ -0.3
GAPVD1-220ENST00000497580 USP43Q70EL4 1123 aa13.21□□□□□ -0.3
GAPVD1-220ENST00000497580 PPP1R16BQ96T49 567 aa13.21□□□□□ -0.3
GAPVD1-220ENST00000497580 CSF3RQ99062 836 aa13.21□□□□□ -0.3
GAPVD1-220ENST00000497580 TMEM39BQ9GZU3 492 aa13.21□□□□□ -0.3
GAPVD1-220ENST00000497580 CHRAC1Q9NRG0 131 aa13.21□□□□□ -0.3
GAPVD1-220ENST00000497580 COX16Q9P0S2 106 aa13.21□□□□□ -0.3
GAPVD1-220ENST00000497580 MTRRQ9UBK8 725 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms