RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 FAM109AQ8N4B1 249 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 SLC15A4Q8N697 577 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 TDRD5Q8NAT2 981 aaKnown RBP3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 PSD4Q8NDX1 1056 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 IPMKQ8NFU5 416 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 NFKBIDQ8NI38 313 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 ETNPPLQ8TBG4 499 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 EXOC4Q96A65 974 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 DACH2Q96NX9 599 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 TRIB1Q96RU8 372 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 PRRX2Q99811 253 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 MESP1Q9BRJ9 268 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 FSD1Q9BTV5 496 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 DNAI2Q9GZS0 605 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 ST6GALNAC4Q9H4F1 302 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 UNKLQ9H9P5 680 aaKnown RBP3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 SLC2A4RGQ9NR83 387 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 TBCCD1Q9NVR7 557 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 HCFC1R1Q9NWW0 138 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 DLL3Q9NYJ7 618 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 DNAJB9Q9UBS3 223 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 SH3BGRL2Q9UJC5 107 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 MYRFQ9Y2G1 1151 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 PLEKHM1Q9Y4G2 1056 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 CCL27Q9Y4X3 112 aa3.88□□□□□ -1.79
EXOSC3-208ENST00000496910 PRAMEF33A0A0G2JMD5 474 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 A0A0U1RQK1 487 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 ZNF320A2RRD8 509 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 E7ENX8 843 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 H0YAE9 185 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 DDX39AO00148 427 aaKnown RBP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 RAB27BO00194 218 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 TNPO2O14787 897 aaKnown RBP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 TP73O15350 636 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 PRAMEF10O60809 474 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 NDUFA10O95299 355 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 METTL18O95568 372 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 TFRCP02786 760 aaKnown RBP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 GRPP07492 148 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 SPATA31D3P0C874 917 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 GAP43P17677 238 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 DDX6P26196 483 aaKnown RBP eCLIP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 ACVR2AP27037 513 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 SERPINA4P29622 427 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 GRK5P34947 590 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 KRT2P35908 639 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 VIPR2P41587 438 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 ANXA11P50995 505 aaKnown RBP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 HSD17B4P51659 736 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 VAV2P52735 878 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 RBM5P52756 815 aaKnown RBP eCLIP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 RARSP54136 660 aaKnown RBP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 UCP3P55916 312 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 TAP2Q03519 686 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 ACTN3Q08043 901 aaPredicted RBP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 RESTQ13127 1097 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 MTA1Q13330 715 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 PDCLQ13371 301 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 TP53BP2Q13625 1128 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 LASP1Q14847 261 aaKnown RBP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 NFIL3Q16649 462 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 AAK1Q2M2I8 961 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 TCP11X2Q5H9J9 407 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 ZNF484Q5JVG2 852 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 FAM160B1Q5W0V3 765 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 ADALQ6DHV7 355 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 PLAG1Q6DJT9 500 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 FCRL6Q6DN72 434 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 TRAT1Q6PIZ9 186 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 CYP20A1Q6UW02 462 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 SPATA31D4Q6ZUB0 917 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 USP51Q70EK9 711 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 GGNQ86UU5 652 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 KRT73Q86Y46 540 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 LINC00346Q8IVM7 164 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 SCN4BQ8IWT1 228 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 ULK2Q8IYT8 1036 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 ADGRG5Q8IZF4 528 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 AOPEPQ8N6M6 819 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 TMCO5AQ8N6Q1 288 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 FAM46DQ8NEK8 389 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 ZNF606Q8WXB4 792 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 ASB10Q8WXI3 467 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 SPSB4Q96A44 273 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 KIF1BPQ96EK5 621 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 CCDC43Q96MW1 224 aaKnown RBP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 ABHD1Q96SE0 405 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 ANP32EQ9BTT0 268 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 ALOXE3Q9BYJ1 711 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 REXO4Q9GZR2 422 aaKnown RBP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 BRD8Q9H0E9 1235 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 RANBP17Q9H2T7 1088 aaKnown RBP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 RMI1Q9H9A7 625 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 COPS7BQ9H9Q2 264 aaPredicted RBP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 LIN28AQ9H9Z2 209 aaKnown RBP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 FSCN3Q9NQT6 498 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 PCDHB16Q9NRJ7 776 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 SNX15Q9NRS6 342 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms