RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ELAVL3Q14576 367 aaKnown RBP22.07■■□□□ 1.12
C9orf3-222ENST00000496567 CRY1Q16526 586 aa22.07■■□□□ 1.12
C9orf3-222ENST00000496567 ANKRD20A2Q5SQ80 823 aa22.07■■□□□ 1.12
C9orf3-222ENST00000496567 ATXN7L2Q5T6C5 722 aaPredicted RBP22.07■■□□□ 1.12
C9orf3-222ENST00000496567 ANKRD20A1Q5TYW2 823 aa22.07■■□□□ 1.12
C9orf3-222ENST00000496567 ANKRD20A3Q5VUR7 823 aa22.07■■□□□ 1.12
C9orf3-222ENST00000496567 ITPRIPL1Q6GPH6 555 aa22.07■■□□□ 1.12
C9orf3-222ENST00000496567 TTC27Q6P3X3 843 aa22.07■■□□□ 1.12
C9orf3-222ENST00000496567 DPY19L3Q6ZPD9 716 aa22.07■■□□□ 1.12
C9orf3-222ENST00000496567 RYBPQ8N488 228 aaPredicted RBP22.07■■□□□ 1.12
C9orf3-222ENST00000496567 CCDC89Q8N998 374 aa22.07■■□□□ 1.12
C9orf3-222ENST00000496567 MNS1Q8NEH6 495 aa22.07■■□□□ 1.12
C9orf3-222ENST00000496567 OR8D1Q8WZ84 308 aa22.07■■□□□ 1.12
C9orf3-222ENST00000496567 EXOC2Q96KP1 924 aa22.07■■□□□ 1.12
C9orf3-222ENST00000496567 SPATA13Q96N96 652 aa22.07■■□□□ 1.12
C9orf3-222ENST00000496567 DDX47Q9H0S4 455 aaKnown RBP22.07■■□□□ 1.12
C9orf3-222ENST00000496567 HECAQ9UBI9 543 aaPredicted RBP22.07■■□□□ 1.12
C9orf3-222ENST00000496567 ALOX15BO15296 676 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 ZBTB24O43167 697 aaPredicted RBP22.06■■□□□ 1.12
C9orf3-222ENST00000496567 PI15O43692 258 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 GCATO75600 419 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 IFNB1P01574 187 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 CCNHP51946 323 aaPredicted RBP22.06■■□□□ 1.12
C9orf3-222ENST00000496567 DGKEP52429 567 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 GDF10P55107 478 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 MAXP61244 160 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 MYLK3Q32MK0 819 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 P3H1Q32P28 736 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 ALG1LQ6GMV1 187 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 DSG4Q86SJ6 1040 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 SRLQ86TD4 932 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 NUDCD1Q96RS6 583 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 HEPHQ9BQS7 1158 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 EPHX3Q9H6B9 360 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 POLMQ9NP87 494 aaPredicted RBP22.06■■□□□ 1.12
C9orf3-222ENST00000496567 SCUBE2Q9NQ36 999 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 DLGAP2Q9P1A6 1054 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 PCYOX1Q9UHG3 505 aa22.06■■□□□ 1.12
C9orf3-222ENST00000496567 MUC3AQ02505 3323 aa22.05■■□□□ 1.12
C9orf3-222ENST00000496567 A0A1W2PQF6 199 aa22.05■■□□□ 1.12
C9orf3-222ENST00000496567 RNASEH1O60930 286 aaKnown RBP22.05■■□□□ 1.12
C9orf3-222ENST00000496567 CR2P20023 1033 aa22.05■■□□□ 1.12
C9orf3-222ENST00000496567 RGRP47804 291 aa22.05■■□□□ 1.12
C9orf3-222ENST00000496567 AP1S1P61966 158 aa22.05■■□□□ 1.12
C9orf3-222ENST00000496567 GRM3Q14832 879 aa22.05■■□□□ 1.12
C9orf3-222ENST00000496567 ARHGEF18Q6ZSZ5 1173 aa22.05■■□□□ 1.12
C9orf3-222ENST00000496567 KLHL7Q8IXQ5 586 aa22.05■■□□□ 1.12
C9orf3-222ENST00000496567 STK40Q8N2I9 435 aa22.05■■□□□ 1.12
C9orf3-222ENST00000496567 CCDC110Q8TBZ0 833 aa22.05■■□□□ 1.12
C9orf3-222ENST00000496567 GLOD4Q9HC38 313 aa22.05■■□□□ 1.12
C9orf3-222ENST00000496567 CKAP5Q14008 2032 aa22.05■■□□□ 1.12
C9orf3-222ENST00000496567 GAS8O95995 478 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 NRLP54845 237 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 MTAPQ13126 283 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 KIAA1211LQ6NV74 962 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 TMEM92Q6UXU6 159 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 C4orf22Q6V702 233 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 MAMSTRQ6ZN01 415 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 FBXL6Q8N531 539 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 CEP112Q8N8E3 955 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 OR2T3Q8NH03 318 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 LRIG1Q96JA1 1093 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 SEMA3CQ99985 751 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 CPEB1Q9BZB8 566 aaKnown RBP22.04■■□□□ 1.12
C9orf3-222ENST00000496567 SLC25A51Q9H1U9 297 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 IL36AQ9UHA7 158 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 RSPH14Q9UHP6 348 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 EVLQ9UI08 416 aaPredicted RBP22.04■■□□□ 1.12
C9orf3-222ENST00000496567 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.04■■□□□ 1.12
C9orf3-222ENST00000496567 INSIG1O15503 277 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 ECEL1O95672 775 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 PRNPP04156 253 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 COL9A1P20849 921 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 CHST14Q8NCH0 376 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 SLCO2A1Q92959 643 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 PPP1R2P1Q96PQ5 205 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 TUBGCP5Q96RT8 1024 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 FAM129BQ96TA1 746 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 GBA3Q9H227 469 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 ZDHHC6Q9H6R6 413 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 CD248Q9HCU0 757 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 PAK5Q9P286 719 aa22.04■■□□□ 1.12
C9orf3-222ENST00000496567 NFKB1P19838 968 aa22.03■■□□□ 1.12
C9orf3-222ENST00000496567 CD68P34810 354 aaPredicted RBP22.03■■□□□ 1.12
C9orf3-222ENST00000496567 CCR3P51677 355 aa22.03■■□□□ 1.12
C9orf3-222ENST00000496567 DSC2Q02487 901 aa22.03■■□□□ 1.12
C9orf3-222ENST00000496567 C2orf54Q08AI8 447 aa22.03■■□□□ 1.12
C9orf3-222ENST00000496567 NCEH1Q6PIU2 408 aa22.03■■□□□ 1.12
C9orf3-222ENST00000496567 TMIEQ8NEW7 156 aa22.03■■□□□ 1.12
C9orf3-222ENST00000496567 OR6K2Q8NGY2 324 aa22.03■■□□□ 1.12
C9orf3-222ENST00000496567 ARRDC2Q8TBH0 407 aa22.03■■□□□ 1.12
C9orf3-222ENST00000496567 IMP4Q96G21 291 aaKnown RBP22.03■■□□□ 1.12
C9orf3-222ENST00000496567 FCRL5Q96RD9 977 aa22.03■■□□□ 1.12
C9orf3-222ENST00000496567 KRT12Q99456 494 aa22.03■■□□□ 1.12
C9orf3-222ENST00000496567 RSPH9Q9H1X1 276 aaPredicted RBP22.03■■□□□ 1.12
C9orf3-222ENST00000496567 ATP13A3Q9H7F0 1226 aa22.03■■□□□ 1.12
C9orf3-222ENST00000496567 NOD2Q9HC29 1040 aa22.03■■□□□ 1.12
C9orf3-222ENST00000496567 CTAGE15A4D2H0 777 aa22.02■■□□□ 1.12
C9orf3-222ENST00000496567 ALDH1A2O94788 518 aa22.02■■□□□ 1.12
C9orf3-222ENST00000496567 SERPINF2P08697 491 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms