RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 RHOT1Q8IXI2 618 aa23.08■■□□□ 1.29
CHRD-217ENST00000496527 TBC1D3Q8IZP1 549 aaPredicted RBP23.08■■□□□ 1.29
CHRD-217ENST00000496527 ACRBPQ8NEB7 543 aa23.08■■□□□ 1.29
CHRD-217ENST00000496527 RAPGEF5Q92565 580 aa23.08■■□□□ 1.29
CHRD-217ENST00000496527 KDM4CQ9H3R0 1056 aa23.08■■□□□ 1.29
CHRD-217ENST00000496527 SLC6A14Q9UN76 642 aa23.08■■□□□ 1.29
CHRD-217ENST00000496527 HYOU1Q9Y4L1 999 aa23.08■■□□□ 1.29
CHRD-217ENST00000496527 FRYLO94915 3013 aa23.07■■□□□ 1.28
CHRD-217ENST00000496527 RNF103O00237 685 aa23.07■■□□□ 1.28
CHRD-217ENST00000496527 PLRG1O43660 514 aaKnown RBP23.07■■□□□ 1.28
CHRD-217ENST00000496527 BUB1BO60566 1050 aaPredicted RBP23.07■■□□□ 1.28
CHRD-217ENST00000496527 SERPINF2P08697 491 aa23.07■■□□□ 1.28
CHRD-217ENST00000496527 GKP32189 559 aa23.07■■□□□ 1.28
CHRD-217ENST00000496527 RFTN1Q14699 578 aaPredicted RBP23.07■■□□□ 1.28
CHRD-217ENST00000496527 ERN2Q76MJ5 926 aaKnown RBP23.07■■□□□ 1.28
CHRD-217ENST00000496527 ZCCHC9Q8N567 271 aaKnown RBP23.07■■□□□ 1.28
CHRD-217ENST00000496527 PCDH19Q8TAB3 1148 aa23.07■■□□□ 1.28
CHRD-217ENST00000496527 HDAC8Q9BY41 377 aa23.07■■□□□ 1.28
CHRD-217ENST00000496527 LHX3Q9UBR4 397 aa23.07■■□□□ 1.28
CHRD-217ENST00000496527 REXO2Q9Y3B8 237 aaKnown RBP23.07■■□□□ 1.28
CHRD-217ENST00000496527 ALG6Q9Y672 507 aa23.07■■□□□ 1.28
CHRD-217ENST00000496527 A0A1B0GTW7 788 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 LNP1A1A4G5 178 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 RCCD1A6NED2 376 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 BCAT2O15382 392 aaPredicted RBP23.06■■□□□ 1.28
CHRD-217ENST00000496527 GDF9O60383 454 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 IGHV4-34P06331 123 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 ITGB7P26010 798 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 CD27P26842 260 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 CCR5P51681 352 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 VAV2P52735 878 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 NAP1L1P55209 391 aaKnown RBP23.06■■□□□ 1.28
CHRD-217ENST00000496527 PIP5KL1Q5T9C9 394 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 KIAA1328Q86T90 577 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 ATPAF2Q8N5M1 289 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 NETO1Q8TDF5 533 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 FAF2Q96CS3 445 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 CALR3Q96L12 384 aaKnown RBP23.06■■□□□ 1.28
CHRD-217ENST00000496527 ZNF599Q96NL3 588 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 EDEM2Q9BV94 578 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 CINPQ9BW66 212 aaPredicted RBP23.06■■□□□ 1.28
CHRD-217ENST00000496527 OSBPL1AQ9BXW6 950 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 RXFP3Q9NSD7 469 aa23.06■■□□□ 1.28
CHRD-217ENST00000496527 DDX56Q9NY93 547 aaKnown RBP23.06■■□□□ 1.28
CHRD-217ENST00000496527 TPX2Q9ULW0 747 aaKnown RBP23.06■■□□□ 1.28
CHRD-217ENST00000496527 KRT1P04264 644 aa23.05■■□□□ 1.28
CHRD-217ENST00000496527 UGT2B4P06133 528 aa23.05■■□□□ 1.28
CHRD-217ENST00000496527 SDHBP21912 280 aa23.05■■□□□ 1.28
CHRD-217ENST00000496527 NEK3P51956 506 aa23.05■■□□□ 1.28
CHRD-217ENST00000496527 PAFAH1B3Q15102 231 aaKnown RBP23.05■■□□□ 1.28
CHRD-217ENST00000496527 RSPO4Q2I0M5 234 aaPredicted RBP23.05■■□□□ 1.28
CHRD-217ENST00000496527 ZNF805Q5CZA5 627 aa23.05■■□□□ 1.28
CHRD-217ENST00000496527 TMCO4Q5TGY1 634 aa23.05■■□□□ 1.28
CHRD-217ENST00000496527 NCBP2-AS2Q69YL0 99 aa23.05■■□□□ 1.28
CHRD-217ENST00000496527 FBXL19Q6PCT2 694 aa23.05■■□□□ 1.28
CHRD-217ENST00000496527 LRRC49Q8IUZ0 686 aa23.05■■□□□ 1.28
CHRD-217ENST00000496527 TXLNBQ8N3L3 684 aa23.05■■□□□ 1.28
CHRD-217ENST00000496527 NSMCE1Q8WV22 266 aa23.05■■□□□ 1.28
CHRD-217ENST00000496527 EXOC2Q96KP1 924 aa23.05■■□□□ 1.28
CHRD-217ENST00000496527 MAK16Q9BXY0 300 aaKnown RBP23.05■■□□□ 1.28
CHRD-217ENST00000496527 CAPN10Q9HC96 672 aa23.05■■□□□ 1.28
CHRD-217ENST00000496527 CDV3Q9UKY7 258 aaKnown RBP23.05■■□□□ 1.28
CHRD-217ENST00000496527 BTNL10A8MVZ5 291 aa23.04■■□□□ 1.28
CHRD-217ENST00000496527 ZNF487B1APH4 448 aa23.04■■□□□ 1.28
CHRD-217ENST00000496527 MFSD11O43934 449 aa23.04■■□□□ 1.28
CHRD-217ENST00000496527 LBRQ14739 615 aaKnown RBP23.04■■□□□ 1.28
CHRD-217ENST00000496527 C11orf63Q6NUN7 778 aa23.04■■□□□ 1.28
CHRD-217ENST00000496527 GDPD4Q6W3E5 623 aa23.04■■□□□ 1.28
CHRD-217ENST00000496527 DAAM2Q86T65 1068 aa23.04■■□□□ 1.28
CHRD-217ENST00000496527 VSIG1Q86XK7 387 aa23.04■■□□□ 1.28
CHRD-217ENST00000496527 TPCN2Q8NHX9 752 aa23.04■■□□□ 1.28
CHRD-217ENST00000496527 KLHL32Q96NJ5 620 aa23.04■■□□□ 1.28
CHRD-217ENST00000496527 RNF157Q96PX1 679 aa23.04■■□□□ 1.28
CHRD-217ENST00000496527 CPEB1Q9BZB8 566 aaKnown RBP23.04■■□□□ 1.28
CHRD-217ENST00000496527 GOLPH3Q9H4A6 298 aa23.04■■□□□ 1.28
CHRD-217ENST00000496527 PREBQ9HCU5 417 aa23.04■■□□□ 1.28
CHRD-217ENST00000496527 SEPT3Q9UH03 358 aa23.04■■□□□ 1.28
CHRD-217ENST00000496527 SALL4Q9UJQ4 1053 aa23.04■■□□□ 1.28
CHRD-217ENST00000496527 A0A1W2PPC4 97 aa23.03■■□□□ 1.28
CHRD-217ENST00000496527 C16orf96A6NNT2 1141 aa23.03■■□□□ 1.28
CHRD-217ENST00000496527 PJA2O43164 708 aa23.03■■□□□ 1.28
CHRD-217ENST00000496527 PSTPIP1O43586 416 aa23.03■■□□□ 1.28
CHRD-217ENST00000496527 MAFKO60675 156 aa23.03■■□□□ 1.28
CHRD-217ENST00000496527 SYPP08247 313 aa23.03■■□□□ 1.28
CHRD-217ENST00000496527 ADRB3P13945 408 aa23.03■■□□□ 1.28
CHRD-217ENST00000496527 ENGP17813 658 aa23.03■■□□□ 1.28
CHRD-217ENST00000496527 RENBPP51606 427 aa23.03■■□□□ 1.28
CHRD-217ENST00000496527 TAS2R38P59533 333 aa23.03■■□□□ 1.28
CHRD-217ENST00000496527 PPP2CBP62714 309 aa23.03■■□□□ 1.28
CHRD-217ENST00000496527 PPP2CAP67775 309 aa23.03■■□□□ 1.28
CHRD-217ENST00000496527 GRM3Q14832 879 aa23.03■■□□□ 1.28
CHRD-217ENST00000496527 PARS2Q7L3T8 475 aaKnown RBP23.03■■□□□ 1.28
CHRD-217ENST00000496527 PRPF39Q86UA1 669 aaKnown RBP23.03■■□□□ 1.28
CHRD-217ENST00000496527 PQLC3Q8N755 202 aa23.03■■□□□ 1.28
CHRD-217ENST00000496527 TSEN2Q8NCE0 465 aaKnown RBP23.03■■□□□ 1.28
CHRD-217ENST00000496527 C1orf216Q8TAB5 229 aa23.03■■□□□ 1.28
CHRD-217ENST00000496527 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.03■■□□□ 1.28
CHRD-217ENST00000496527 RNF25Q96BH1 459 aaPredicted RBP23.03■■□□□ 1.28
CHRD-217ENST00000496527 LACRTQ9GZZ8 138 aa23.03■■□□□ 1.28
CHRD-217ENST00000496527 DUSP10Q9Y6W6 482 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms