RNA–Protein interactions for RNA: ENST00000496498.1

NPDC1-206, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 383 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-206ENST00000496498 TBC1D3EA0A087X179 549 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 TBC1D3KA0A087X1G2 549 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 A0A1W2PPC4 97 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 TBC1D3FA6NER0 549 aaPredicted RBP18.31■□□□□ 0.52
NPDC1-206ENST00000496498 FAM47DPA6NHR8 397 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 BTNL10A8MVZ5 291 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 PATE3B3GLJ2 98 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 TBC1D3LB9A6J9 549 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 J3KR12 359 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 SLC30A4O14863 429 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 IGHV4-34P06331 123 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 TBC1D3HP0C7X1 549 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 IL4RP24394 825 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 HSPA9P38646 679 aaKnown RBP18.31■□□□□ 0.52
NPDC1-206ENST00000496498 ID4P47928 161 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 CSNK1DP48730 415 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 RENBPP51606 427 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 AFF3P51826 1226 aaKnown RBP18.31■□□□□ 0.52
NPDC1-206ENST00000496498 METAP1P53582 386 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 IRX4P78413 519 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 PAFAH1B3Q15102 231 aaKnown RBP18.31■□□□□ 0.52
NPDC1-206ENST00000496498 TEAD4Q15561 434 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 RSPO4Q2I0M5 234 aaPredicted RBP18.31■□□□□ 0.52
NPDC1-206ENST00000496498 ODF2Q5BJF6 829 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 ANKRD20A8PQ5CZ79 823 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 ZNF805Q5CZA5 627 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 PIP5KL1Q5T9C9 394 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 TBC1D3GQ6DHY5 549 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 TBC1D3CQ6IPX1 549 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 TCEAL6Q6IPX3 200 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 LEKR1Q6ZMV7 388 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 TBC1D3Q8IZP1 549 aaPredicted RBP18.31■□□□□ 0.52
NPDC1-206ENST00000496498 BBS5Q8N3I7 341 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 ZCCHC9Q8N567 271 aaKnown RBP18.31■□□□□ 0.52
NPDC1-206ENST00000496498 ATPAF2Q8N5M1 289 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 NSMCE1Q8WV22 266 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 TCEAL3Q969E4 200 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 ARRDC3Q96B67 414 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 TUBGCP5Q96RT8 1024 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 CINPQ9BW66 212 aaPredicted RBP18.31■□□□□ 0.52
NPDC1-206ENST00000496498 MIR1-1HGQ9H1L0 117 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 TMEM9BQ9NQ34 198 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 PCDH15Q96QU1 1955 aa18.31■□□□□ 0.52
NPDC1-206ENST00000496498 KRIT1O00522 736 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 LATO43561 262 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 PSTPIP1O43586 416 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 AP1G1O43747 822 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 SPOPO43791 374 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 PALMO75781 387 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 CD48P09326 243 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 ENGP17813 658 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 KDELR1P24390 212 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 MAOBP27338 520 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 MAPK8P45983 427 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 GRIA4P48058 902 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 SUOXP51687 545 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 ATXN3P54252 364 aaPredicted RBP18.3■□□□□ 0.52
NPDC1-206ENST00000496498 NSUN2Q08J23 767 aaKnown RBP eCLIP18.3■□□□□ 0.52
NPDC1-206ENST00000496498 CYTH1Q15438 398 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 POM121L1PQ3SYA9 428 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 C11orf63Q6NUN7 778 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 FBXL19Q6PCT2 694 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 PRPF39Q86UA1 669 aaKnown RBP18.3■□□□□ 0.52
NPDC1-206ENST00000496498 C1orf216Q8TAB5 229 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 HCAR2Q8TDS4 363 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 SKA1Q96BD8 255 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 ETNK2Q9NVF9 386 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 HAUS2Q9NVX0 235 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 LHX3Q9UBR4 397 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 SEPT3Q9UH03 358 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 DMTF1Q9Y222 760 aa18.3■□□□□ 0.52
NPDC1-206ENST00000496498 LRRD1A4D1F6 860 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 ARHGAP33O14559 1287 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 ADRB3P13945 408 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 MX2P20592 715 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 RACK1P63244 317 aaKnown RBP18.29■□□□□ 0.52
NPDC1-206ENST00000496498 MMRN1Q13201 1228 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 ATP13A4Q4VNC1 1196 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 ATXN7L2Q5T6C5 722 aaPredicted RBP18.29■□□□□ 0.52
NPDC1-206ENST00000496498 STPG1Q5TH74 334 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 NCBP2-AS2Q69YL0 99 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 TIGD7Q6NT04 549 aaPredicted RBP18.29■□□□□ 0.52
NPDC1-206ENST00000496498 IL27RAQ6UWB1 636 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 GDPD4Q6W3E5 623 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 RAD9BQ6WBX8 426 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 CPNE8Q86YQ8 564 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 TMEM139Q8IV31 216 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 SPC24Q8NBT2 197 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 PCDH19Q8TAB3 1148 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 FATE1Q969F0 183 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 RMDN1Q96DB5 314 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 PSKH2Q96QS6 385 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 DKK3Q9UBP4 350 aa18.29■□□□□ 0.52
NPDC1-206ENST00000496498 GDF9O60383 454 aa18.28■□□□□ 0.52
NPDC1-206ENST00000496498 BUB1BO60566 1050 aaPredicted RBP18.28■□□□□ 0.52
NPDC1-206ENST00000496498 MAFKO60675 156 aa18.28■□□□□ 0.52
NPDC1-206ENST00000496498 ZFXP17010 805 aaPredicted RBP18.28■□□□□ 0.52
NPDC1-206ENST00000496498 COMTP21964 271 aa18.28■□□□□ 0.52
NPDC1-206ENST00000496498 VAV2P52735 878 aa18.28■□□□□ 0.52
NPDC1-206ENST00000496498 TAS2R38P59533 333 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms