RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 EPHA8P29322 1005 aaPredicted RBP15.99■□□□□ 0.15
HDAC4-213ENST00000496347 ZNF135P52742 658 aaPredicted RBP15.99■□□□□ 0.15
HDAC4-213ENST00000496347 UBASH3AP57075 661 aa15.99■□□□□ 0.15
HDAC4-213ENST00000496347 ZNF284Q2VY69 593 aa15.99■□□□□ 0.15
HDAC4-213ENST00000496347 ZSCAN23Q3MJ62 389 aa15.99■□□□□ 0.15
HDAC4-213ENST00000496347 TMEM259Q4ZIN3 620 aa15.99■□□□□ 0.15
HDAC4-213ENST00000496347 INO80DQ53TQ3 878 aaPredicted RBP15.99■□□□□ 0.15
HDAC4-213ENST00000496347 TDRD12Q587J7 1177 aaKnown RBP15.99■□□□□ 0.15
HDAC4-213ENST00000496347 PARS2Q7L3T8 475 aaKnown RBP15.99■□□□□ 0.15
HDAC4-213ENST00000496347 RHBDD1Q8TEB9 315 aa15.99■□□□□ 0.15
HDAC4-213ENST00000496347 RAB7BQ96AH8 199 aa15.99■□□□□ 0.15
HDAC4-213ENST00000496347 ARHGEF26Q96DR7 871 aa15.99■□□□□ 0.15
HDAC4-213ENST00000496347 MAGEB5Q9BZ81 275 aa15.99■□□□□ 0.15
HDAC4-213ENST00000496347 BTBD3Q9Y2F9 522 aa15.99■□□□□ 0.15
HDAC4-213ENST00000496347 RASA4BC9J798 803 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 RASA4O43374 803 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 TNFSF14O43557 240 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 BUB1O43683 1085 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 PRPSAP2O60256 369 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 RNF8O76064 485 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 DKK1O94907 266 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 IGSF6O95976 241 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 TPM3P06753 285 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 SPINK2P20155 84 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 HNRNPA2B1P22626 353 aaKnown RBP15.98■□□□□ 0.15
HDAC4-213ENST00000496347 AKT2P31751 481 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 RXRGP48443 463 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 RPS21P63220 83 aaKnown RBP15.98■□□□□ 0.15
HDAC4-213ENST00000496347 ZBED6P86452 979 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 IL9RQ01113 521 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 ACACAQ13085 2346 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 SERINC3Q13530 473 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 STAT4Q14765 748 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 ZNF805Q5CZA5 627 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 FBXL19Q6PCT2 694 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 ZNF354CQ86Y25 554 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 FAM174AQ8TBP5 190 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 GATA6Q92908 595 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 HMCESQ96FZ2 354 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 SNRNP25Q9BV90 132 aaKnown RBP15.98■□□□□ 0.15
HDAC4-213ENST00000496347 TMEM121BQ9BXQ6 578 aaPredicted RBP15.98■□□□□ 0.15
HDAC4-213ENST00000496347 ISCUQ9H1K1 167 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 FTSJ1Q9UET6 329 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 KLK13Q9UKR3 277 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 MSRB2Q9Y3D2 182 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 ACTL7AQ9Y615 435 aa15.98■□□□□ 0.15
HDAC4-213ENST00000496347 GOLGA4Q13439 2230 aaKnown RBP15.98■□□□□ 0.15
HDAC4-213ENST00000496347 FAM221BA6H8Z2 402 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 RNF103O00237 685 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 EEF2KO00418 725 aaKnown RBP15.97■□□□□ 0.15
HDAC4-213ENST00000496347 KRIT1O00522 736 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 KCNK3O14649 394 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 PCDH8O95206 1070 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 POP4O95707 220 aaKnown RBP15.97■□□□□ 0.15
HDAC4-213ENST00000496347 TOP3BO95985 862 aaKnown RBP15.97■□□□□ 0.15
HDAC4-213ENST00000496347 PROS1P07225 676 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 PRLRP16471 622 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 NDST2P52849 883 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 ACAP1Q15027 740 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 SKOR2Q2VWA4 1001 aaPredicted RBP15.97■□□□□ 0.15
HDAC4-213ENST00000496347 ERMARDQ5T6L9 678 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 HGSNATQ68CP4 663 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 RYBPQ8N488 228 aaPredicted RBP15.97■□□□□ 0.15
HDAC4-213ENST00000496347 OR6K2Q8NGY2 324 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 SAP25Q8TEE9 199 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 PEBP4Q96S96 227 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 TRIM7Q9C029 511 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 DHX35Q9H5Z1 703 aaKnown RBP15.97■□□□□ 0.15
HDAC4-213ENST00000496347 LRRC19Q9H756 370 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 TOR4AQ9NXH8 423 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 FADS3Q9Y5Q0 445 aa15.97■□□□□ 0.15
HDAC4-213ENST00000496347 APC2O95996 2303 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 ANKRD36A6QL64 1941 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 SLC31A1O15431 190 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 TSPAN6O43657 245 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 LRCH4O75427 683 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 SERPING1P05155 500 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 UGT2B4P06133 528 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 ITGAVP06756 1048 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 SKILP12757 684 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 MIPP30301 263 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 PCK1P35558 622 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 RHOAP61586 193 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 RAD51Q06609 339 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 SHBQ15464 509 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 SEL1L3Q68CR1 1132 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 RFX8Q6ZV50 586 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 CYP4V2Q6ZWL3 525 aaPredicted RBP15.96■□□□□ 0.15
HDAC4-213ENST00000496347 ABI3BPQ7Z7G0 1075 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 SPATS2Q86XZ4 545 aaKnown RBP15.96■□□□□ 0.15
HDAC4-213ENST00000496347 ARFGAP1Q8N6T3 406 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 PDFQ9HBH1 243 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 GPATCH2LQ9NWQ4 482 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 UBA2Q9UBT2 640 aaPredicted RBP15.96■□□□□ 0.15
HDAC4-213ENST00000496347 CAPN11Q9UMQ6 739 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 ZFR2Q9UPR6 939 aaKnown RBP15.96■□□□□ 0.15
HDAC4-213ENST00000496347 MFHAS1Q9Y4C4 1052 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 FAM208BQ5VWN6 2430 aa15.96■□□□□ 0.15
HDAC4-213ENST00000496347 KNTC1P50748 2209 aa15.95■□□□□ 0.14
HDAC4-213ENST00000496347 C16orf96A6NNT2 1141 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms