RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 BUB1O43683 1085 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 PRAMEF11O60813 436 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 CBFA2T3O75081 653 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 MFAP3LO75121 409 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 IL4RP24394 825 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 PMLP29590 882 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 RECQLP46063 649 aaPredicted RBP12.52□□□□□ -0.41
TRIM59-207ENST00000496222 PAPOLAP51003 745 aaKnown RBP12.52□□□□□ -0.41
TRIM59-207ENST00000496222 DNA2P51530 1060 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 ARSEP51690 589 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 ZNF423Q2M1K9 1284 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 SMTNL2Q2TAL5 461 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 ZNF284Q2VY69 593 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 MYLK3Q32MK0 819 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 TMEM259Q4ZIN3 620 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 BOLA3Q53S33 107 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 PPP6R3Q5H9R7 873 aaPredicted RBP12.52□□□□□ -0.41
TRIM59-207ENST00000496222 ATXN7L2Q5T6C5 722 aaPredicted RBP12.52□□□□□ -0.41
TRIM59-207ENST00000496222 NEK5Q6P3R8 708 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 IL27RAQ6UWB1 636 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 OR6K2Q8NGY2 324 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 FAM71BQ8TC56 605 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 CASKIN2Q8WXE0 1202 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 CELF6Q96J87 481 aaKnown RBP12.52□□□□□ -0.41
TRIM59-207ENST00000496222 LRIG1Q96JA1 1093 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 SERAC1Q96JX3 654 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 CAMK1GQ96NX5 476 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 ETNK2Q9NVF9 386 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 IP6K2Q9UHH9 426 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 MFHAS1Q9Y4C4 1052 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 FADS3Q9Y5Q0 445 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 CEP295Q9C0D2 2601 aa12.52□□□□□ -0.41
TRIM59-207ENST00000496222 FREM2Q5SZK8 3169 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 CHD8Q9HCK8 2581 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 TRPM6Q9BX84 2022 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 H0Y8X5 98 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 KCNK3O14649 394 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 AP1G1O43747 822 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 SH3BP5O60239 455 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 RNGTTO60942 597 aaKnown RBP12.51□□□□□ -0.41
TRIM59-207ENST00000496222 POP4O95707 220 aaKnown RBP12.51□□□□□ -0.41
TRIM59-207ENST00000496222 CER1O95813 267 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 ADRB3P13945 408 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 CD38P28907 300 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 MAT2AP31153 395 aaKnown RBP12.51□□□□□ -0.41
TRIM59-207ENST00000496222 ZNF135P52742 658 aaPredicted RBP12.51□□□□□ -0.41
TRIM59-207ENST00000496222 SNRPD1P62314 119 aaKnown RBP12.51□□□□□ -0.41
TRIM59-207ENST00000496222 FGL2Q14314 439 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 SHBQ15464 509 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 TEAD4Q15561 434 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 NAPEPLDQ6IQ20 393 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 ARHGAP36Q6ZRI8 547 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 PARS2Q7L3T8 475 aaKnown RBP12.51□□□□□ -0.41
TRIM59-207ENST00000496222 HORMAD1Q86X24 394 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 TMEM145Q8NBT3 493 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 BAHD1Q8TBE0 780 aaPredicted RBP12.51□□□□□ -0.41
TRIM59-207ENST00000496222 TEKT4Q8WW24 435 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 CSPG4P5Q96PW8 444 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 ZDHHC6Q9H6R6 413 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 PCDH18Q9HCL0 1135 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 TM7SF3Q9NS93 570 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 DONSONQ9NYP3 566 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 DMTF1Q9Y222 760 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 PCDHGB2Q9Y5G2 931 aa12.51□□□□□ -0.41
TRIM59-207ENST00000496222 A0A1W2PQU0 124 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 C16orf96A6NNT2 1141 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 MYO1FO00160 1098 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 INSIG1O15503 277 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 PEX11BO96011 259 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 AMPD1P23109 780 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 NUDT1P36639 197 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 ABL2P42684 1182 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 NEK3P51956 506 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 ATP13A4Q4VNC1 1196 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 ZNF805Q5CZA5 627 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 SEL1L3Q68CR1 1132 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 PRPF39Q86UA1 669 aaKnown RBP12.5□□□□□ -0.41
TRIM59-207ENST00000496222 GAS2L3Q86XJ1 694 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 SPATS2Q86XZ4 545 aaKnown RBP12.5□□□□□ -0.41
TRIM59-207ENST00000496222 NAXDQ8IW45 347 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 TC2NQ8N9U0 490 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 MFSD2AQ8NA29 543 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 ZNF564Q8TBZ8 553 aaPredicted RBP12.5□□□□□ -0.41
TRIM59-207ENST00000496222 HSPH1Q92598 858 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 PPP1R16AQ96I34 528 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 NSMCE3Q96MG7 304 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 CPEB1Q9BZB8 566 aaKnown RBP12.5□□□□□ -0.41
TRIM59-207ENST00000496222 RBSNQ9H1K0 784 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 ZWILCHQ9H900 591 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 NHEJ1Q9H9Q4 299 aaPredicted RBP12.5□□□□□ -0.41
TRIM59-207ENST00000496222 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRIM59-207ENST00000496222 UVRAGQ9P2Y5 699 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 UBA2Q9UBT2 640 aaPredicted RBP12.5□□□□□ -0.41
TRIM59-207ENST00000496222 GGT7Q9UJ14 662 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 CA5BQ9Y2D0 317 aa12.5□□□□□ -0.41
TRIM59-207ENST00000496222 ZZEF1O43149 2961 aa12.49□□□□□ -0.41
TRIM59-207ENST00000496222 A0A1B0GTQ1 180 aa12.49□□□□□ -0.41
TRIM59-207ENST00000496222 SPAARA0A1B0GVQ0 90 aa12.49□□□□□ -0.41
TRIM59-207ENST00000496222 ARHGAP42A6NI28 874 aa12.49□□□□□ -0.41
TRIM59-207ENST00000496222 TLR4O00206 839 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms