RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 ITGAXP20702 1163 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 ARNTP27540 789 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 ADRA1AP35348 466 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 SLC1A2P43004 574 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 NUMBP49757 651 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 MLLT6P55198 1093 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-209ENST00000494623 RAB10P61026 200 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 MAXP61244 160 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 LRRC8EQ6NSJ5 796 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 TIGD7Q6NT04 549 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-209ENST00000494623 POTEHQ6S545 545 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 TMC7Q7Z402 723 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 ZNF354CQ86Y25 554 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 KBTBD2Q8IY47 623 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 CCNYL1Q8N7R7 359 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 RTL3Q8N8U3 475 aaKnown RBP11.35□□□□□ -0.59
CHMP3-209ENST00000494623 GPR152Q8TDT2 470 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 PYDC1Q8WXC3 89 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 UROC1Q96N76 676 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 LENG8Q96PV6 779 aaPredicted RBP11.35□□□□□ -0.59
CHMP3-209ENST00000494623 NUF2Q9BZD4 464 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 UPF3AQ9H1J1 476 aaKnown RBP11.35□□□□□ -0.59
CHMP3-209ENST00000494623 NDE1Q9NXR1 346 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 XPR1Q9UBH6 696 aa11.35□□□□□ -0.59
CHMP3-209ENST00000494623 BRCA2P51587 3418 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 SCN10AQ9Y5Y9 1956 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 TTC24A2A3L6 582 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-209ENST00000494623 KCNU1A8MYU2 1149 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 MATN2O00339 956 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 DLX3O60479 287 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 ADAMTS4O75173 837 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 PAX7P23759 505 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 HOXC13P31276 330 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 GRK4P32298 578 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 CSRP3P50461 194 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 WNT3AP56704 352 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 TAS2R39P59534 338 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 KLC1Q07866 573 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 DLG1Q12959 904 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 CMPK2Q5EBM0 449 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 ARTNQ5T4W7 220 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 SEL1L3Q68CR1 1132 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 NXNQ6DKJ4 435 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 ZNF470Q6ECI4 717 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 ZNF280DQ6N043 979 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 RANBP10Q6VN20 620 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 HPS6Q86YV9 775 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 RNF135Q8IUD6 432 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 KLHDC8BQ8IXV7 354 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 SLC26A7Q8TE54 656 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 UCMAQ8WVF2 138 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 SPDL1Q96EA4 605 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 KLHL5Q96PQ7 755 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 CDH22Q9UJ99 828 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 SSX2IPQ9Y2D8 614 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 J3KR12 359 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 AIM2O14862 343 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 AURKAO14965 403 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 HDAC3O15379 428 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 TYMPP19971 482 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 GLDCP23378 1020 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 CCND3P30281 292 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-209ENST00000494623 OR1G1P47890 313 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 SLC12A2P55011 1212 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 LSM12Q3MHD2 195 aaKnown RBP11.34□□□□□ -0.59
CHMP3-209ENST00000494623 TCHHL1Q5QJ38 904 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-209ENST00000494623 PIK3R6Q5UE93 754 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 CAPRIN2Q6IMN6 1127 aaKnown RBP11.34□□□□□ -0.59
CHMP3-209ENST00000494623 RDH11Q8TC12 318 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 ACTRT2Q8TDY3 377 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 STYXQ8WUJ0 223 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 SERPINB11Q96P15 392 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 UBE2OQ9C0C9 1292 aaKnown RBP11.34□□□□□ -0.59
CHMP3-209ENST00000494623 S100A14Q9HCY8 104 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 NT5MQ9NPB1 228 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 PACSIN3Q9UKS6 424 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 FBXO5Q9UKT4 447 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 PCDHB8Q9UN66 801 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 ARHGAP26Q9UNA1 814 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 LRCH1Q9Y2L9 728 aa11.34□□□□□ -0.59
CHMP3-209ENST00000494623 PRG3Q9Y2Y8 225 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-209ENST00000494623 BPTFQ12830 3046 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 LIN7AO14910 233 aaPredicted RBP11.33□□□□□ -0.6
CHMP3-209ENST00000494623 GRID2O43424 1007 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 FKBP6O75344 327 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 TBX18O95935 607 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 PAMP19021 973 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 CD151P48509 253 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 TBL3Q12788 808 aaKnown RBP11.33□□□□□ -0.6
CHMP3-209ENST00000494623 TMCO4Q5TGY1 634 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 METTL21CQ5VZV1 264 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 NEPROQ6NW34 567 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 TMEM154Q6P9G4 183 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 PGM2L1Q6PCE3 622 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 CNSTQ6PJW8 725 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 EP400NLQ6ZTU2 488 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 RTN4RL1Q86UN2 441 aaPredicted RBP11.33□□□□□ -0.6
CHMP3-209ENST00000494623 CNTN4Q8IWV2 1026 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 NUP93Q8N1F7 819 aa11.33□□□□□ -0.6
CHMP3-209ENST00000494623 FAM136AQ96C01 138 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms