RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 KYAT3Q6YP21 454 aaKnown RBP10.79□□□□□ -0.68
CLCN6-208ENST00000494028 CHST9Q7L1S5 443 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 CLEC14AQ86T13 490 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 ZC3HC1Q86WB0 502 aaKnown RBP10.79□□□□□ -0.68
CLCN6-208ENST00000494028 ZNF354CQ86Y25 554 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 TRIM42Q8IWZ5 723 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 GPR65Q8IYL9 337 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 CFAP52Q8N1V2 620 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 ACVR1CQ8NER5 493 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 RFWD2Q8NHY2 731 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 NSMCE1Q8WV22 266 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 ATXN7L3BQ96GX2 97 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 C7orf26Q96N11 449 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 ZNF599Q96NL3 588 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 YME1L1Q96TA2 773 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 MGME1Q9BQP7 344 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 FAM167BQ9BTA0 163 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 RHOJQ9H4E5 214 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 RETREG1Q9H6L5 497 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 IL21Q9HBE4 155 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 RXFP1Q9HBX9 757 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 NPHS2Q9NP85 383 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 NSMCE4AQ9NXX6 385 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 SLC2A6Q9UGQ3 507 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 ZFP37Q9Y6Q3 630 aaPredicted RBP10.79□□□□□ -0.68
CLCN6-208ENST00000494028 A0A1B0GVM2 712 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 HEATR9A2RTY3 570 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 TCAF2A6NFQ2 919 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 GOLGA8TH3BQL2 631 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 PRRG1O14668 218 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 BIRC5O15392 142 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 LILRB3O75022 631 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 LATS1O95835 1130 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 RHOCP08134 193 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 ACRP10323 421 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 RAG1P15918 1043 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 ETFBP38117 255 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 SLC1A2P43004 574 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 HARS2P49590 506 aaKnown RBP10.78□□□□□ -0.68
CLCN6-208ENST00000494028 IRF9Q00978 393 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 CREMQ03060 361 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 BST1Q10588 318 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 OVGP1Q12889 678 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 MSLNQ13421 630 aaPredicted RBP10.78□□□□□ -0.68
CLCN6-208ENST00000494028 GRM3Q14832 879 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 CHI3L2Q15782 390 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 INSCQ1MX18 579 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 MBLAC2Q68D91 279 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 FSTL4Q6MZW2 842 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 CXorf57Q6NSI4 855 aaKnown RBP10.78□□□□□ -0.68
CLCN6-208ENST00000494028 C16orf46Q6P387 395 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 UBE2Q1Q7Z7E8 422 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 TMC8Q8IU68 726 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 DENND1CQ8IV53 801 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 TCEAL8Q8IYN2 117 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 SLC25A41Q8N5S1 370 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 FITM2Q8N6M3 262 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 PPM1EQ8WY54 764 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 FEM1CQ96JP0 617 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 PRKD2Q9BZL6 878 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 POLR1EQ9GZS1 481 aaKnown RBP10.78□□□□□ -0.68
CLCN6-208ENST00000494028 MYLK2Q9H1R3 596 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 MAGEH1Q9H213 219 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 ATXN3LQ9H3M9 355 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 CAB39LQ9H9S4 337 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.78□□□□□ -0.68
CLCN6-208ENST00000494028 UXTQ9UBK9 157 aaPredicted RBP10.78□□□□□ -0.68
CLCN6-208ENST00000494028 AGO1Q9UL18 857 aaKnown RBP10.78□□□□□ -0.68
CLCN6-208ENST00000494028 CHKBQ9Y259 395 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 MTO1Q9Y2Z2 717 aaKnown RBP10.78□□□□□ -0.68
CLCN6-208ENST00000494028 ACTL7AQ9Y615 435 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 CAPN7Q9Y6W3 813 aa10.78□□□□□ -0.68
CLCN6-208ENST00000494028 A0A0D9SEW6 157 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 E2F8A0AVK6 867 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 TTC24A2A3L6 582 aaPredicted RBP10.77□□□□□ -0.69
CLCN6-208ENST00000494028 GFRA2O00451 464 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 TEX28O15482 410 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 SNNO75324 88 aaPredicted RBP10.77□□□□□ -0.69
CLCN6-208ENST00000494028 CLDN11O75508 207 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 TGDSO95455 350 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 F11P03951 625 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 CTSAP10619 480 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 FGF3P11487 239 aaPredicted RBP10.77□□□□□ -0.69
CLCN6-208ENST00000494028 PAMP19021 973 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 GLDCP23378 1020 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 GABRB3P28472 473 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 TYK2P29597 1187 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 ALDH3A1P30838 453 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 RGRP47804 291 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 PPP3CCP48454 512 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 SERPINH1P50454 418 aaKnown RBP10.77□□□□□ -0.69
CLCN6-208ENST00000494028 OXCT1P55809 520 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 HTRA4P83105 476 aaPredicted RBP10.77□□□□□ -0.69
CLCN6-208ENST00000494028 TMPRSS15P98073 1019 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 PDE1BQ01064 536 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 DLG2Q15700 870 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 PPM1JQ5JR12 505 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 SIRPB2Q5JXA9 342 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 TSTD2Q5T7W7 516 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 Q6ZNB5 142 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms