RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 GAS1P54826 345 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 SLC37A1P57057 533 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 RPL36AP83881 106 aaKnown RBP3.54□□□□□ -1.84
PTCD3-218ENST00000493430 GALEQ14376 348 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 CRY2Q49AN0 593 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 Q5PR19 223 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 C16orf89Q6UX73 402 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 RBM23Q86U06 439 aaKnown RBP3.54□□□□□ -1.84
PTCD3-218ENST00000493430 PAQR4Q8N4S7 273 aaPredicted RBP3.54□□□□□ -1.84
PTCD3-218ENST00000493430 PRR26Q8N8Z3 221 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 ADPRHL1Q8NDY3 354 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 ISCA1Q9BUE6 129 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 GLIS2Q9BZE0 524 aaPredicted RBP3.54□□□□□ -1.84
PTCD3-218ENST00000493430 MAP6D1Q9H9H5 199 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 GJB4Q9NTQ9 266 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 MYO1AQ9UBC5 1043 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 TRMT112Q9UI30 125 aaKnown RBP3.54□□□□□ -1.84
PTCD3-218ENST00000493430 SSC5DA1L4H1 1573 aa3.54□□□□□ -1.84
PTCD3-218ENST00000493430 LOC285556D6RIA3 1793 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 IBTKQ9P2D0 1353 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-218ENST00000493430 CYSRT1A8MQ03 144 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 HTATSF1O43719 755 aaKnown RBP3.53□□□□□ -1.84
PTCD3-218ENST00000493430 PQBP1O60828 265 aaKnown RBP3.53□□□□□ -1.84
PTCD3-218ENST00000493430 TOMM70O94826 608 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 CYP1A2P05177 515 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 HSPA1AP0DMV8 641 aaKnown RBP3.53□□□□□ -1.84
PTCD3-218ENST00000493430 HSPA1BP0DMV9 641 aaKnown RBP3.53□□□□□ -1.84
PTCD3-218ENST00000493430 PECAM1P16284 738 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-218ENST00000493430 EGR1P18146 543 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 GABRB3P28472 473 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 EPHX2P34913 555 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 GMPSP49915 693 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-218ENST00000493430 RASSF2P50749 326 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 CRYZQ08257 329 aaKnown RBP3.53□□□□□ -1.84
PTCD3-218ENST00000493430 CSHL1Q14406 222 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 ARHGAP15Q53QZ3 475 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 WDR93Q6P2C0 686 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 Q6ZTK2 550 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 MOB2Q70IA6 237 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 CTU1Q7Z7A3 348 aaKnown RBP3.53□□□□□ -1.84
PTCD3-218ENST00000493430 CUZD1Q86UP6 607 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 NPIPB3Q92617 1050 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 TTC17Q96AE7 1141 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 FAR2Q96K12 515 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 UTP14AQ9BVJ6 771 aaKnown RBP3.53□□□□□ -1.84
PTCD3-218ENST00000493430 EIF2AQ9BY44 585 aaKnown RBP3.53□□□□□ -1.84
PTCD3-218ENST00000493430 DCLK3Q9C098 648 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 CDT1Q9H211 546 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 TAF1DQ9H5J8 278 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-218ENST00000493430 SFXN1Q9H9B4 322 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 PLAC1Q9HBJ0 212 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 KRCC1Q9NPI7 259 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-218ENST00000493430 DDX21Q9NR30 783 aaKnown RBP eCLIP3.53□□□□□ -1.84
PTCD3-218ENST00000493430 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.53□□□□□ -1.84
PTCD3-218ENST00000493430 TBC1D14Q9P2M4 693 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 POLLQ9UGP5 575 aa3.53□□□□□ -1.84
PTCD3-218ENST00000493430 LCTP09848 1927 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 SH3TC1Q8TE82 1336 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 PDE4DIPQ5VU43 2346 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 PI4KAP2A4QPH2 592 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 PSMD14O00487 310 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 KPNA5O15131 536 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 TAF5LO75529 589 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 KAT7O95251 611 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 IGKV3-20P01619 116 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 LCKP06239 509 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 HOXD3P31249 432 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-218ENST00000493430 PCYT1AP49585 367 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 CXCL9Q07325 125 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 NSUN2Q08J23 767 aaKnown RBP eCLIP3.52□□□□□ -1.85
PTCD3-218ENST00000493430 PMPCAQ10713 525 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 MAPKAPK3Q16644 382 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 TWISTNBQ3B726 338 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-218ENST00000493430 DGKKQ5KSL6 1271 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 MSANTD2Q6P1R3 559 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 SLC16A12Q6ZSM3 486 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 RTL10Q7L3V2 364 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 KDELC2Q7Z4H8 507 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 C14orf80Q86SX3 495 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 GPSM1Q86YR5 675 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 RASGRP3Q8IV61 690 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 PI4KAP1Q8N8J0 262 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 RNF152Q8N8N0 203 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 TTC8Q8TAM2 541 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 LMO3Q8TAP4 145 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 NR4A3Q92570 626 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 KAT2AQ92830 837 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 URB1-AS1Q96HZ7 61 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 PAAF1Q9BRP4 392 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 COLEC11Q9BWP8 271 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 TEX13AQ9BXU3 409 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-218ENST00000493430 TM6SF1Q9BZW5 370 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 C6orf106Q9H6K1 298 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-218ENST00000493430 RMI1Q9H9A7 625 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 KCNK9Q9NPC2 374 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 NCKIPSDQ9NZQ3 722 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 TNFSF13BQ9Y275 285 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 RLFQ13129 1914 aa3.52□□□□□ -1.85
PTCD3-218ENST00000493430 PASKQ96RG2 1323 aa3.51□□□□□ -1.85
PTCD3-218ENST00000493430 PNMA6EA0A0J9YXQ4 647 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms