RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 APODP05090 189 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 ZNF806P0C7X5 589 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 POU3F2P20265 443 aaPredicted RBP6.92□□□□□ -1.3
VPS52-219ENST00000493379 ADH6P28332 368 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 HLA-FP30511 346 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 ADH7P40394 386 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 ARHGAP25P42331 645 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 DGKGP49619 791 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 SULT1E1P49888 294 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 ZNF135P52742 658 aaPredicted RBP6.92□□□□□ -1.3
VPS52-219ENST00000493379 CDH4P55283 916 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 OXCT1P55809 520 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 RPS26P62854 115 aaKnown RBP6.92□□□□□ -1.3
VPS52-219ENST00000493379 NME3Q13232 169 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 CAMK2GQ13555 558 aaPredicted RBP6.92□□□□□ -1.3
VPS52-219ENST00000493379 DMC1Q14565 340 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 ANO4Q32M45 955 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 BOLA3Q53S33 107 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 TMEM215Q68D42 235 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 RFWD3Q6PCD5 774 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 DCUN1D2Q6PH85 259 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 ZNF783Q6ZMS7 281 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 SYT13Q7L8C5 426 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 VN1R5Q7Z5H4 357 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 C14orf80Q86SX3 495 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 ADIPOR2Q86V24 386 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 NLRP14Q86W24 1093 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 VSIG1Q86XK7 387 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 DNAAF5Q86Y56 855 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 CHCHD4Q8N4Q1 142 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 CAMKK1Q8N5S9 505 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 FAM181AQ8N9Y4 354 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 IL17RCQ8NAC3 791 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 HJURPQ8NCD3 748 aaPredicted RBP6.92□□□□□ -1.3
VPS52-219ENST00000493379 DEFB124Q8NES8 71 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 TTC8Q8TAM2 541 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 WFIKKN2Q8TEU8 576 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 DDI1Q8WTU0 396 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 FAM172AQ8WUF8 416 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 UBE2Q2Q8WVN8 375 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 IGSF8Q969P0 613 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 ZNF653Q96CK0 615 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 ARHGEF26Q96DR7 871 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 SEC16BQ96JE7 1060 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 MCEEQ96PE7 176 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 GABRG3Q99928 467 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.92□□□□□ -1.3
VPS52-219ENST00000493379 FAM126AQ9BYI3 521 aaPredicted RBP6.92□□□□□ -1.3
VPS52-219ENST00000493379 FAM204AQ9H8W3 233 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 ARHGEF4Q9NR80 690 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 SEPT11Q9NVA2 429 aaKnown RBP6.92□□□□□ -1.3
VPS52-219ENST00000493379 THAP10Q9P2Z0 257 aaPredicted RBP6.92□□□□□ -1.3
VPS52-219ENST00000493379 OR12D3Q9UGF7 316 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 EBF1Q9UH73 591 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 GPN3Q9UHW5 284 aaPredicted RBP6.92□□□□□ -1.3
VPS52-219ENST00000493379 INTS6Q9UL03 887 aaKnown RBP6.92□□□□□ -1.3
VPS52-219ENST00000493379 FZD10Q9ULW2 581 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 SOX13Q9UN79 622 aa6.92□□□□□ -1.3
VPS52-219ENST00000493379 EPN1Q9Y6I3 576 aaPredicted RBP6.92□□□□□ -1.3
VPS52-219ENST00000493379 MGAQ8IWI9 3026 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 DNHD1Q96M86 4753 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 A0A1B0GVM2 712 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 TBC1D3BA6NDS4 549 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 TCAF2A6NFQ2 919 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 TMCO5BA8MYB1 307 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 F5H5T6 163 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 MYO1FO00160 1098 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 TRIM24O15164 1050 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 PJA2O43164 708 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 AKR1B10O60218 316 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 FOXD2O60548 495 aaPredicted RBP6.91□□□□□ -1.3
VPS52-219ENST00000493379 TBL1XO60907 577 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 LRCH4O75427 683 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 RNF8O76064 485 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 LUC7L3O95232 432 aaKnown RBP6.91□□□□□ -1.3
VPS52-219ENST00000493379 NDUFA10O95299 355 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 B3GALT4O96024 378 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 MAN1A1P33908 653 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 CXCL12P48061 93 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 FNTBP49356 437 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 CCR3P51677 355 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 ARSEP51690 589 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 GSDMDP57764 484 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 RPS24P62847 133 aaKnown RBP6.91□□□□□ -1.3
VPS52-219ENST00000493379 GEN1Q17RS7 908 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 ARL13BQ3SXY8 428 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 FSCBQ5H9T9 825 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 RABGAP1LQ5R372 815 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 ERMARDQ5T6L9 678 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 RAP1GAP2Q684P5 730 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 GRAMD4Q6IC98 578 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 CXorf57Q6NSI4 855 aaKnown RBP6.91□□□□□ -1.3
VPS52-219ENST00000493379 ZNF662Q6ZS27 426 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 SLFN11Q7Z7L1 901 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 PHLDB2Q86SQ0 1253 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 RASSF3Q86WH2 238 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 FAM131BQ86XD5 332 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 SFTPA1Q8IWL2 248 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 RHOT2Q8IXI1 618 aa6.91□□□□□ -1.3
VPS52-219ENST00000493379 LGI2Q8N0V4 545 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms