RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 SPDYCQ5MJ68 293 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 NCBP2-AS2Q69YL0 99 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 TBC1D3GQ6DHY5 549 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 TBC1D3CQ6IPX1 549 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 DPY19L3Q6ZPD9 716 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 CYP2U1Q7Z449 544 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 RABEPKQ7Z6M1 372 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 NT5DC3Q86UY8 548 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 PLPP6Q8IY26 295 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 CCDC13Q8IYE1 715 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 TBC1D3Q8IZP1 549 aaPredicted RBP8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 NDUFAF2Q8N183 169 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 NPWQ8N729 165 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 OR2A12Q8NGT7 310 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 OR14C36Q8NHC7 312 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 FRS2Q8WU20 508 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 NELL1Q92832 810 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 FAF2Q96CS3 445 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 TRIM44Q96DX7 344 aaPredicted RBP8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 TOE1Q96GM8 510 aaKnown RBP8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 PDLIM2Q96JY6 352 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 GPR174Q9BXC1 333 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 HEMGNQ9BXL5 484 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 EPC1Q9H2F5 836 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 NOL6Q9H6R4 1146 aaKnown RBP8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 RAPGEFL1Q9UHV5 662 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 FZD4Q9ULV1 537 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 hCG_1818297A0A087WSY0 165 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 IGHV1OR15-9A0A0B4J2B8 117 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 PRR23AA6NEV1 266 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 H7C0C1 242 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 MATN3O15232 486 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 SLC7A4O43246 635 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 MTSS1O43312 755 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 HRO43593 1189 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 MAP3K6O95382 1288 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 SEMA4FO95754 770 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 UGT2B4P06133 528 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 IL4RP24394 825 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 CDKN2BP42772 138 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 ATP5OP48047 213 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 NEK3P51956 506 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 POLR2LP62875 67 aaKnown RBP8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 CREB5Q02930 508 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 NSUN2Q08J23 767 aaKnown RBP eCLIP8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 GALNT2Q10471 571 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 SRSF5Q13243 272 aaKnown RBP8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 HNRNPDQ14103 355 aaKnown RBP8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 LLGL1Q15334 1064 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 MAP7D1Q3KQU3 841 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 PLK5Q496M5 336 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 ATXN7L2Q5T6C5 722 aaPredicted RBP8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 LYSMD4Q5XG99 296 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 AFMIDQ63HM1 303 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 SLC9A4Q6AI14 798 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 GDPD4Q6W3E5 623 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 ZNF662Q6ZS27 426 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 ERN2Q76MJ5 926 aaKnown RBP8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 ARMCX6Q7L4S7 300 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 SRLQ86TD4 932 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 ARHGAP12Q8IWW6 846 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 TMEFF1Q8IYR6 380 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 PLD5Q8N7P1 536 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 LRRC57Q8N9N7 239 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 TTC13Q8NBP0 860 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 NETO2Q8NC67 525 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 OR6K2Q8NGY2 324 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 TFB1MQ8WVM0 346 aaKnown RBP8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 MAIP1Q8WWC4 291 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 KRT35Q92764 455 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 LRRC45Q96CN5 670 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 HDAC11Q96DB2 347 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 LOXL4Q96JB6 756 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 EXOC2Q96KP1 924 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 FAM129BQ96TA1 746 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 OSBPL8Q9BZF1 889 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 POLR1EQ9GZS1 481 aaKnown RBP8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 KLC2Q9H0B6 622 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 NT5MQ9NPB1 228 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 RBM22Q9NW64 420 aaKnown RBP eCLIP8.25□□□□□ -1.098e-6■■□□□ 12.7
TM4SF1-204ENST00000493348 WSB2Q9NYS7 404 aaPredicted RBP8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 DTLQ9NZJ0 730 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 USP36Q9P275 1121 aaKnown RBP8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 SUSD2Q9UGT4 822 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 AMACRQ9UHK6 382 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 EVLQ9UI08 416 aaPredicted RBP8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 PPM1HQ9ULR3 514 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 TPX2Q9ULW0 747 aaKnown RBP8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 PACSIN2Q9UNF0 486 aaPredicted RBP8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 EFR3BQ9Y2G0 817 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 MFHAS1Q9Y4C4 1052 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 CAPN6Q9Y6Q1 641 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 GON4LQ3T8J9 2241 aa8.25□□□□□ -1.09
TM4SF1-204ENST00000493348 PI4KAP42356 2102 aa8.24□□□□□ -1.09
TM4SF1-204ENST00000493348 TRPM6Q9BX84 2022 aa8.24□□□□□ -1.09
TM4SF1-204ENST00000493348 A0A1W2PQ67 120 aa8.24□□□□□ -1.09
TM4SF1-204ENST00000493348 C3orf70A6NLC5 250 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms