RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 CAND1Q86VP6 1230 aaKnown RBP14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 PGBD5Q8N414 524 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 SPATA22Q8NHS9 363 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 IMP4Q96G21 291 aaKnown RBP14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 LMLNQ96KR4 655 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 PSKH2Q96QS6 385 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 FAM83CQ9BQN1 747 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 EBF3Q9H4W6 596 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 GGA2Q9UJY4 613 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 SRRM3A6NNA2 597 aaPredicted RBP14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 ALOX15BO15296 676 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 HOXC11O43248 304 aaPredicted RBP14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 MBTPS2O43462 519 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 AVILO75366 819 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 CD160O95971 181 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 MT-CYBP00156 380 aaPredicted RBP14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 MYZAPP0CAP1 466 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 PABPC1P11940 636 aaKnown RBP14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 ARSAP15289 507 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 SP100P23497 879 aaPredicted RBP14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 GRIA1P42261 906 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 MAGEA3P43357 314 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 DSC2Q02487 901 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 ZNF844Q08AG5 666 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 CBLBQ13191 982 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 MPP3Q13368 585 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 SPARCL1Q14515 664 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 PITRM1Q5JRX3 1037 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 HP1BP3Q5SSJ5 553 aaPredicted RBP14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 AGBL2Q5U5Z8 902 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 ALG1LQ6GMV1 187 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 NAPEPLDQ6IQ20 393 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 PTCRAQ6ISU1 281 aaPredicted RBP14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 LRRC8BQ6P9F7 803 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 LINC00523Q86TU6 105 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 YAF2Q8IY57 180 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 ARFGAP2Q8N6H7 521 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 SUSD6Q92537 303 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 ELSPBP1Q96BH3 223 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 C9orf72Q96LT7 481 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 TTC25Q96NG3 672 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 XPO6Q96QU8 1125 aaKnown RBP14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 MGME1Q9BQP7 344 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 VPS45Q9NRW7 570 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 INTS6Q9UL03 887 aaKnown RBP14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 CXorf51AA0A1B0GTR3 108 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 MUSKO15146 869 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 RIPK2O43353 540 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 BANF1O75531 89 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 TMCC1O94876 653 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 TTC4O95801 387 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 IL9P15248 144 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 PSMC3P17980 439 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 NIPAL4Q0D2K0 466 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 SMAD4Q13485 552 aaKnown RBP14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 DMC1Q14565 340 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 FASTKD3Q14CZ7 662 aaKnown RBP14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 KYNUQ16719 465 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 DENND2CQ68D51 928 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 ASTLQ6HA08 431 aaPredicted RBP14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 PRPF39Q86UA1 669 aaKnown RBP14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 NAT16Q8N8M0 369 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 ARRDC2Q8TBH0 407 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 PYROXD1Q8WU10 500 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 LRRC39Q96DD0 335 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 SEMA3CQ99985 751 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 KXD1Q9BQD3 176 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 FSD1LQ9BXM9 530 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 NINJ2Q9NZG7 142 aa14.28□□□□□ -0.12
PDZRN3-210ENST00000492909 ANKRD36A6QL64 1941 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 USP12O75317 370 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 PMPCBO75439 489 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 ACSL3O95573 720 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 LSP1P33241 339 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 MDH1P40925 334 aaKnown RBP14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 CD86P42081 329 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 SLC29A2Q14542 456 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 CYTH1Q15438 398 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 FUT11Q495W5 492 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 CCDC38Q502W7 563 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 PARM1Q6UWI2 310 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 MTSS1LQ765P7 747 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 METTL3Q86U44 580 aaKnown RBP14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 AHI1Q8N157 1196 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 FBXO36Q8NEA4 188 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 IPMKQ8NFU5 416 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 FGF14Q92915 247 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 TBL1YQ9BQ87 522 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 PLA2G2FQ9BZM2 168 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 EPN3Q9H201 632 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 EPB41L4BQ9H329 900 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 ECT2Q9H8V3 914 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 FBXO10Q9UK96 956 aa14.27□□□□□ -0.12
PDZRN3-210ENST00000492909 AP3B1O00203 1094 aa14.27□□□□□ -0.13
PDZRN3-210ENST00000492909 ECI2O75521 394 aa14.27□□□□□ -0.13
PDZRN3-210ENST00000492909 MT-CO1P00395 513 aa14.27□□□□□ -0.13
PDZRN3-210ENST00000492909 MMP2P08253 660 aa14.27□□□□□ -0.13
PDZRN3-210ENST00000492909 CES1P23141 567 aa14.27□□□□□ -0.13
PDZRN3-210ENST00000492909 ELK3P41970 407 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms