RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 A0A1W2PPC4 97 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 TBC1D3FA6NER0 549 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 SOWAHDA6NJG2 315 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 TBC1D3LB9A6J9 549 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 J3KR12 359 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 KRIT1O00522 736 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 ARHGAP33O14559 1287 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 LATO43561 262 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 TBC1D3HP0C7X1 549 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 ENGP17813 658 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 IL4RP24394 825 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 MAOBP27338 520 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 GRIA4P48058 902 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 AFF3P51826 1226 aaKnown RBP10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 NEK3P51956 506 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 TAS2R40P59535 323 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 GRM3Q14832 879 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 MYLK3Q32MK0 819 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 POM121L1PQ3SYA9 428 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 TMCO4Q5TGY1 634 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 STPG1Q5TH74 334 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 LRRC38Q5VT99 294 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 TBC1D3GQ6DHY5 549 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 TBC1D3CQ6IPX1 549 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 NEK5Q6P3R8 708 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 ZSCAN30Q86W11 494 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 TRIM69Q86WT6 500 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 CPNE8Q86YQ8 564 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 TBC1D3Q8IZP1 549 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 RYBPQ8N488 228 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 ATPAF2Q8N5M1 289 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 KCTD6Q8NC69 237 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 C1orf216Q8TAB5 229 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 FAF2Q96CS3 445 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 CALN1Q9BXU9 219 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 ZDHHC5Q9C0B5 715 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 RXFP3Q9NSD7 469 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 ETNK2Q9NVF9 386 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 LHX3Q9UBR4 397 aa10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 IPO11Q9UI26 975 aaKnown RBP10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 EPN1Q9Y6I3 576 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE1-206ENST00000492796 ZNF487B1APH4 448 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 PLK4O00444 970 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 PALMO75781 387 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 CD48P09326 243 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 ADRB3P13945 408 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 KDELR1P24390 212 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 HSPA9P38646 679 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 MAPK8P45983 427 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 NOP2P46087 812 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 ATXN3P54252 364 aaPredicted RBP10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 TAS2R38P59533 333 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 RACK1P63244 317 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 PAFAH1B3Q15102 231 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 CYTH1Q15438 398 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 TEAD4Q15561 434 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 ATP13A4Q4VNC1 1196 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 SETMARQ53H47 684 aaPredicted RBP10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 ANKRD20A8PQ5CZ79 823 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 ZNF805Q5CZA5 627 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 ZFYVE27Q5T4F4 411 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 ATXN7L2Q5T6C5 722 aaPredicted RBP10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 FBXL19Q6PCT2 694 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 IL27RAQ6UWB1 636 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 PARS2Q7L3T8 475 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 PRPF39Q86UA1 669 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 LRRC49Q8IUZ0 686 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 RHOT1Q8IXI2 618 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 TXLNBQ8N3L3 684 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 OR6K2Q8NGY2 324 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 RAB7BQ96AH8 199 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 BAG1Q99933 345 aaPredicted RBP10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 ORAI3Q9BRQ5 295 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 CINPQ9BW66 212 aaPredicted RBP10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 CPEB1Q9BZB8 566 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 TM9SF3Q9HD45 589 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 DDX56Q9NY93 547 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 DMTF1Q9Y222 760 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 ADAMTS9Q9P2N4 1935 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 PI4KAP42356 2102 aa10.81□□□□□ -0.68
CDC42SE1-206ENST00000492796 TP53BP1Q12888 1972 aaPredicted RBP10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 C16orf96A6NNT2 1141 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 RNF103O00237 685 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 CDX4O14627 284 aaPredicted RBP10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 PSTPIP1O43586 416 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 AP1G1O43747 822 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 SPOPO43791 374 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 MAFKO60675 156 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 UGT2B4P06133 528 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 CSNK1DP48730 415 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 RENBPP51606 427 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 PPP2CBP62714 309 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 PPP2CAP67775 309 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 NSUN2Q08J23 767 aaKnown RBP eCLIP10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 GRIK2Q13002 908 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 MMRN1Q13201 1228 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 LBRQ14739 615 aaKnown RBP10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 ODF2Q5BJF6 829 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 NCBP2-AS2Q69YL0 99 aa10.8□□□□□ -0.68
CDC42SE1-206ENST00000492796 NAPEPLDQ6IQ20 393 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms