RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 KCNA5P22460 613 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 GRK2P25098 689 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 WNT3AP56704 352 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 SLC34A1Q06495 639 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 CCDC153Q494R4 210 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 MANEALQ5VSG8 457 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 FAM91A1Q658Y4 838 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 EXT2Q93063 718 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 IGSF8Q969P0 613 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 PSMG2Q969U7 264 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 SUSD3Q96L08 255 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 RHOJQ9H4E5 214 aa12.61□□□□□ -0.39
HMGN1-220ENST00000492280 DLX3O60479 287 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 CYP11A1P05108 521 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 ITGAXP20702 1163 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 VHLP40337 213 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 ARCN1P48444 511 aaKnown RBP12.6□□□□□ -0.39
HMGN1-220ENST00000492280 NPY2RP49146 381 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 EIF4EBP2Q13542 120 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-220ENST00000492280 INSCQ1MX18 579 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 TSTD2Q5T7W7 516 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 TMC7Q7Z402 723 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 OR6Y1Q8NGX8 325 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 IRGQQ8WZA9 623 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 ISL2Q96A47 359 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 LENG8Q96PV6 779 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-220ENST00000492280 SMIM14Q96QK8 99 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 IL12RB2Q99665 862 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 OLFM1Q99784 485 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 OSBPL2Q9H1P3 480 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 TNFRSF12AQ9NP84 129 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 OXSMQ9NWU1 459 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 PATJQ8NI35 1801 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 ERI2A8K979 691 aaKnown RBP12.6□□□□□ -0.39
HMGN1-220ENST00000492280 MATN3O15232 486 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 MTSS1O43312 755 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 ZNF623O75123 536 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 SLC10A3P09131 477 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 PRSS56P0CW18 603 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 ARSDP51689 593 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 FBXO48Q5FWF7 155 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 PCID2Q5JVF3 399 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 LRRC8EQ6NSJ5 796 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 RNF111Q6ZNA4 994 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 PIM3Q86V86 326 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 CFAP52Q8N1V2 620 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 PPHLN1Q8NEY8 458 aaKnown RBP12.6□□□□□ -0.39
HMGN1-220ENST00000492280 SLC26A7Q8TE54 656 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 MIEF2Q96C03 454 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 SEPT5Q99719 369 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-220ENST00000492280 DDX50Q9BQ39 737 aaKnown RBP12.6□□□□□ -0.39
HMGN1-220ENST00000492280 TCF7L2Q9NQB0 619 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 RNF186Q9NXI6 227 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 RRN3Q9NYV6 651 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 ADAM28Q9UKQ2 775 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 TCAF1Q9Y4C2 921 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 LRRC42Q9Y546 428 aa12.6□□□□□ -0.39
HMGN1-220ENST00000492280 GREB1Q4ZG55 1949 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 TMEM88BA6NKF7 163 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 ATP6V1C1P21283 382 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 CCNCP24863 283 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 CCNG1P51959 295 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 RAP1GDS1P52306 607 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 LSM12Q3MHD2 195 aaKnown RBP12.59□□□□□ -0.39
HMGN1-220ENST00000492280 STXBP5Q5T5C0 1151 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 EPGNQ6UW88 154 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 ZNF598Q86UK7 904 aaKnown RBP12.59□□□□□ -0.39
HMGN1-220ENST00000492280 RTL3Q8N8U3 475 aaKnown RBP12.59□□□□□ -0.39
HMGN1-220ENST00000492280 TXNDC5Q8NBS9 432 aaKnown RBP12.59□□□□□ -0.39
HMGN1-220ENST00000492280 HEXDCQ8WVB3 486 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 USP13Q92995 863 aaPredicted RBP12.59□□□□□ -0.39
HMGN1-220ENST00000492280 PHF21BQ96EK2 531 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 FCRL5Q96RD9 977 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 VAT1Q99536 393 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 TBC1D13Q9NVG8 400 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 DNAJC28Q9NX36 388 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 STX18Q9P2W9 335 aaKnown RBP12.59□□□□□ -0.39
HMGN1-220ENST00000492280 A0A0U1RQS6 177 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 FAM155AB1AL88 458 aaPredicted RBP12.59□□□□□ -0.39
HMGN1-220ENST00000492280 STX16-NPEPL1H3BU86 382 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 MAGEC1O60732 1142 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 MPOP05164 745 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 ANPEPP15144 967 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 ACVRL1P37023 503 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 CSE1LP55060 971 aaKnown RBP12.59□□□□□ -0.39
HMGN1-220ENST00000492280 ACTR3P61158 418 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 COG7P83436 770 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 LPCAT4Q643R3 524 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 IZUMO2Q6UXV1 221 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 RSPO2Q6UXX9 243 aaPredicted RBP12.59□□□□□ -0.39
HMGN1-220ENST00000492280 TMEM173Q86WV6 379 aaPredicted RBP12.59□□□□□ -0.39
HMGN1-220ENST00000492280 SNX32Q86XE0 403 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 LSMEM2Q8N112 164 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 ARHGAP24Q8N264 748 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 TTC16Q8NEE8 873 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 EXOC2Q96KP1 924 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 MMADHCQ9H3L0 296 aaPredicted RBP12.59□□□□□ -0.39
HMGN1-220ENST00000492280 CATSPERBQ9H7T0 1116 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 YY1AP1Q9H869 796 aa12.59□□□□□ -0.39
HMGN1-220ENST00000492280 GTSE1Q9NYZ3 720 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms