RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 COBLL1Q53SF7 1204 aa4.15□□□□□ -1.75
PHC3-213ENST00000491258 TMEM268Q5VZI3 342 aa4.15□□□□□ -1.75
PHC3-213ENST00000491258 PATL1Q86TB9 770 aaKnown RBP4.15□□□□□ -1.75
PHC3-213ENST00000491258 TRIM74Q86UV6 250 aa4.15□□□□□ -1.75
PHC3-213ENST00000491258 TRIM73Q86UV7 250 aa4.15□□□□□ -1.75
PHC3-213ENST00000491258 C18orf8Q96DM3 657 aa4.15□□□□□ -1.75
PHC3-213ENST00000491258 FBXO17Q96EF6 278 aa4.15□□□□□ -1.75
PHC3-213ENST00000491258 NPAS1Q99742 590 aa4.15□□□□□ -1.75
PHC3-213ENST00000491258 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.75
PHC3-213ENST00000491258 SLC39A10Q9ULF5 831 aa4.15□□□□□ -1.75
PHC3-213ENST00000491258 LZTS1Q9Y250 596 aa4.15□□□□□ -1.75
PHC3-213ENST00000491258 ADAM18Q9Y3Q7 739 aa4.15□□□□□ -1.75
PHC3-213ENST00000491258 FHOD3Q2V2M9 1422 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 SNED1Q8TER0 1413 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 CUL7Q14999 1698 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 RASA4BC9J798 803 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 CH25HO95992 272 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 CRYAAP02489 173 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 MYL3P08590 195 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 HSPA7P48741 367 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 ATP12AP54707 1039 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 ALKBH1Q13686 389 aaKnown RBP4.14□□□□□ -1.75
PHC3-213ENST00000491258 GXYLT1Q4G148 440 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 TUBA1AQ71U36 451 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 DPP9Q86TI2 863 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 KLHDC8BQ8IXV7 354 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 RBFAQ8N0V3 343 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 RFWD2Q8NHY2 731 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 GPT2Q8TD30 523 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 C2CD4CQ8TF44 421 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 SCMH1Q96GD3 660 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 DUX3Q96PT4 197 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 TUBA1CQ9BQE3 449 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 CADM1Q9BY67 442 aaKnown RBP4.14□□□□□ -1.75
PHC3-213ENST00000491258 NPFFR1Q9GZQ6 430 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 TP63Q9H3D4 680 aaPredicted RBP4.14□□□□□ -1.75
PHC3-213ENST00000491258 UBTD1Q9HAC8 227 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 CLK4Q9HAZ1 481 aaKnown RBP4.14□□□□□ -1.75
PHC3-213ENST00000491258 OSGIN2Q9Y236 505 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 PCDHGB2Q9Y5G2 931 aa4.14□□□□□ -1.75
PHC3-213ENST00000491258 NPIPB13A6NJU9 1138 aa4.13□□□□□ -1.75
PHC3-213ENST00000491258 NPIPB5A8MRT5 1133 aa4.13□□□□□ -1.75
PHC3-213ENST00000491258 NPIPB4C9JG80 1138 aa4.13□□□□□ -1.75
PHC3-213ENST00000491258 ASNA1O43681 348 aa4.13□□□□□ -1.75
PHC3-213ENST00000491258 HEXIM1O94992 359 aaKnown RBP4.13□□□□□ -1.75
PHC3-213ENST00000491258 DPP6P42658 865 aa4.13□□□□□ -1.75
PHC3-213ENST00000491258 CYP4A11Q02928 519 aa4.13□□□□□ -1.75
PHC3-213ENST00000491258 GATAD2AQ86YP4 633 aa4.13□□□□□ -1.75
PHC3-213ENST00000491258 FAM177A1Q8N128 213 aaPredicted RBP4.13□□□□□ -1.75
PHC3-213ENST00000491258 MUL1Q969V5 352 aa4.13□□□□□ -1.75
PHC3-213ENST00000491258 MTBPQ96DY7 904 aa4.13□□□□□ -1.75
PHC3-213ENST00000491258 FEM1CQ96JP0 617 aa4.13□□□□□ -1.75
PHC3-213ENST00000491258 RIPOR3Q96MK2 946 aa4.13□□□□□ -1.75
PHC3-213ENST00000491258 ZNF385AQ96PM9 386 aaKnown RBP4.13□□□□□ -1.75
PHC3-213ENST00000491258 SEPSECSQ9HD40 501 aaKnown RBP4.13□□□□□ -1.75
PHC3-213ENST00000491258 ARID4BQ4LE39 1312 aaPredicted RBP4.13□□□□□ -1.75
PHC3-213ENST00000491258 ADGRL1O94910 1474 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 NUP153P49790 1475 aaKnown RBP4.12□□□□□ -1.75
PHC3-213ENST00000491258 ABCA8O94911 1581 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 IGHV4OR15-8A0A075B7B6 117 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 TIMM23O14925 209 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 SYN3O14994 580 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 PMM2O15305 246 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 LYL1P12980 280 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 KCNA5P22460 613 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 TROAPQ12815 778 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 CALCRLQ16602 461 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 PLEKHA7Q6IQ23 1121 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 MARK2Q7KZI7 788 aaKnown RBP4.12□□□□□ -1.75
PHC3-213ENST00000491258 WDSUB1Q8N9V3 476 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 ZNF485Q8NCK3 441 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 TEFMQ96QE5 360 aaKnown RBP4.12□□□□□ -1.75
PHC3-213ENST00000491258 NAA15Q9BXJ9 866 aaKnown RBP4.12□□□□□ -1.75
PHC3-213ENST00000491258 ACAD9Q9H845 621 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 TMEM51Q9NW97 253 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 KIAA0556O60303 1618 aa4.12□□□□□ -1.75
PHC3-213ENST00000491258 ARAP3Q8WWN8 1544 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 FAM172BPA6NC97 362 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 FAM90A18PA6NE21 464 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 FAM90A16PA6NEW6 464 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 FAM90A9PA6NNJ1 464 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 FAM90A5PA8MXJ8 464 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 HNRNPCL2B2RXH8 293 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 CHL1O00533 1208 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 PMS2P2O95744 297 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 FAM90A15PP0C7V4 464 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 FAM90A14PP0C7W9 464 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 SSTR2P30874 369 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 FMO4P31512 558 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 NLRP5P59047 1200 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 KRTAP10-3P60369 221 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 TBRG1Q3YBR2 411 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 C14orf177Q52M58 125 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 IZUMO3Q5VZ72 239 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 FOXL2NBQ6ZUU3 175 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 SCN4BQ8IWT1 228 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 AFAP1Q8N556 730 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 TBC1D22AQ8WUA7 517 aa4.11□□□□□ -1.75
PHC3-213ENST00000491258 OR1F2PQ96R84 312 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms