RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 CLDN2P57739 230 aa18.3■□□□□ 0.52
HMGN1-219ENST00000491183 YBEYP58557 167 aaPredicted RBP18.3■□□□□ 0.52
HMGN1-219ENST00000491183 FGL2Q14314 439 aa18.3■□□□□ 0.52
HMGN1-219ENST00000491183 MYLK3Q32MK0 819 aa18.3■□□□□ 0.52
HMGN1-219ENST00000491183 SFMBT2Q5VUG0 894 aa18.3■□□□□ 0.52
HMGN1-219ENST00000491183 PPP1R2P3Q6NXS1 205 aa18.3■□□□□ 0.52
HMGN1-219ENST00000491183 FBXL19Q6PCT2 694 aa18.3■□□□□ 0.52
HMGN1-219ENST00000491183 MARCH9Q86YJ5 346 aa18.3■□□□□ 0.52
HMGN1-219ENST00000491183 RYBPQ8N488 228 aaPredicted RBP18.3■□□□□ 0.52
HMGN1-219ENST00000491183 OXR1Q8N573 874 aa18.3■□□□□ 0.52
HMGN1-219ENST00000491183 ZCCHC14Q8WYQ9 949 aaKnown RBP18.3■□□□□ 0.52
HMGN1-219ENST00000491183 HMCESQ96FZ2 354 aa18.3■□□□□ 0.52
HMGN1-219ENST00000491183 BMFQ96LC9 184 aa18.3■□□□□ 0.52
HMGN1-219ENST00000491183 CAAP1Q9H8G2 361 aa18.3■□□□□ 0.52
HMGN1-219ENST00000491183 PARVAQ9NVD7 372 aa18.3■□□□□ 0.52
HMGN1-219ENST00000491183 GPATCH2LQ9NWQ4 482 aa18.3■□□□□ 0.52
HMGN1-219ENST00000491183 ARID1BQ8NFD5 2236 aaPredicted RBP18.3■□□□□ 0.52
HMGN1-219ENST00000491183 IGF2RP11717 2491 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 TMEM191CA6NGB0 347 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 C16orf96A6NNT2 1141 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 RASA4BC9J798 803 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 KRIT1O00522 736 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 RASA4O43374 803 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 AP1G1O43747 822 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 TMCC1O94876 653 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 POP4O95707 220 aaKnown RBP18.29■□□□□ 0.52
HMGN1-219ENST00000491183 LDOC1O95751 146 aaPredicted RBP18.29■□□□□ 0.52
HMGN1-219ENST00000491183 FTLP02792 175 aaPredicted RBP18.29■□□□□ 0.52
HMGN1-219ENST00000491183 THEGLP0DJG4 465 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 GZMAP12544 262 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 SKILP12757 684 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 HNRNPA2B1P22626 353 aaKnown RBP18.29■□□□□ 0.52
HMGN1-219ENST00000491183 AKT2P31751 481 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 ABL2P42684 1182 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 SNRPD1P62314 119 aaKnown RBP18.29■□□□□ 0.52
HMGN1-219ENST00000491183 CA9Q16790 459 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 CCDC157Q569K6 752 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 ZNF805Q5CZA5 627 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 ATXN7L2Q5T6C5 722 aaPredicted RBP18.29■□□□□ 0.52
HMGN1-219ENST00000491183 GCNT7Q6ZNI0 430 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 UMODL1-AS1Q8N2C9 162 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 OR13H1Q8NG92 308 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 LRIG1Q96JA1 1093 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 EPAS1Q99814 870 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 SLC17A9Q9BYT1 436 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 EDEM3Q9BZQ6 932 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 TRIM7Q9C029 511 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 CBX8Q9HC52 389 aa18.29■□□□□ 0.52
HMGN1-219ENST00000491183 SYCE3A1L190 88 aa18.28■□□□□ 0.52
HMGN1-219ENST00000491183 ZSCAN5CA6NGD5 496 aaPredicted RBP18.28■□□□□ 0.52
HMGN1-219ENST00000491183 TAF4O00268 1085 aa18.28■□□□□ 0.52
HMGN1-219ENST00000491183 ENC1O14682 589 aa18.28■□□□□ 0.52
HMGN1-219ENST00000491183 RAD51BO15315 384 aa18.28■□□□□ 0.52
HMGN1-219ENST00000491183 PAK4O96013 591 aaPredicted RBP18.28■□□□□ 0.52
HMGN1-219ENST00000491183 SERPINC1P01008 464 aa18.28■□□□□ 0.52
HMGN1-219ENST00000491183 PSMA2P25787 234 aa18.28■□□□□ 0.52
HMGN1-219ENST00000491183 RPS21P63220 83 aaKnown RBP18.28■□□□□ 0.52
HMGN1-219ENST00000491183 KLHL30Q0D2K2 578 aa18.28■□□□□ 0.52
HMGN1-219ENST00000491183 DNAJC3Q13217 504 aa18.28■□□□□ 0.52
HMGN1-219ENST00000491183 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
HMGN1-219ENST00000491183 SERINC3Q13530 473 aa18.28■□□□□ 0.52
HMGN1-219ENST00000491183 INO80DQ53TQ3 878 aaPredicted RBP18.28■□□□□ 0.52
HMGN1-219ENST00000491183 ABI3BPQ7Z7G0 1075 aa18.28■□□□□ 0.52
HMGN1-219ENST00000491183 LUZP1Q86V48 1076 aa18.28■□□□□ 0.52
HMGN1-219ENST00000491183 ZNF354CQ86Y25 554 aa18.28■□□□□ 0.52
HMGN1-219ENST00000491183 FEM1CQ96JP0 617 aa18.28■□□□□ 0.52
HMGN1-219ENST00000491183 CNDP2Q96KP4 475 aaKnown RBP18.28■□□□□ 0.52
HMGN1-219ENST00000491183 KLHL32Q96NJ5 620 aa18.28■□□□□ 0.52
HMGN1-219ENST00000491183 PEBP4Q96S96 227 aa18.28■□□□□ 0.52
HMGN1-219ENST00000491183 CATSPERBQ9H7T0 1116 aa18.28■□□□□ 0.52
HMGN1-219ENST00000491183 TDRD6O60522 2096 aaKnown RBP18.27■□□□□ 0.52
HMGN1-219ENST00000491183 SRRM3A6NNA2 597 aaPredicted RBP18.27■□□□□ 0.52
HMGN1-219ENST00000491183 SPINT1O43278 529 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 SDC3O75056 442 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 UGT2B4P06133 528 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 CYTH1Q15438 398 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 SMAD1Q15797 465 aaKnown RBP18.27■□□□□ 0.52
HMGN1-219ENST00000491183 KLHL40Q2TBA0 621 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 PARP15Q460N3 678 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 FIGNQ5HY92 759 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 KIAA1161Q6NSJ0 714 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 DHRS13Q6UX07 377 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 CYP4V2Q6ZWL3 525 aaPredicted RBP18.27■□□□□ 0.52
HMGN1-219ENST00000491183 SLC22A18ASQ8N1D0 253 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 SLC25A45Q8N413 288 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 CASKIN2Q8WXE0 1202 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 TSC1Q92574 1164 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 RAB7BQ96AH8 199 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 C1QTNF2Q9BXJ5 285 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 DHX35Q9H5Z1 703 aaKnown RBP18.27■□□□□ 0.52
HMGN1-219ENST00000491183 LRRC19Q9H756 370 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 KLHL11Q9NVR0 708 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 CNOT8Q9UFF9 292 aaKnown RBP18.27■□□□□ 0.52
HMGN1-219ENST00000491183 PCSK1NQ9UHG2 260 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 GGT7Q9UJ14 662 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 AP4E1Q9UPM8 1137 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 ITM2BQ9Y287 266 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 HS3ST3A1Q9Y663 406 aa18.27■□□□□ 0.52
HMGN1-219ENST00000491183 WDFY3Q8IZQ1 3526 aa18.26■□□□□ 0.51
HMGN1-219ENST00000491183 POM121BA6NF01 834 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms