RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 AKAP10O43572 662 aa19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 TIPRLO75663 272 aa19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 CABYRO75952 493 aa19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 FUCA1P04066 466 aa19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 GNAO1P09471 354 aa19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 NDST1P52848 882 aa19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 PRKAA2P54646 552 aa19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 PRKCQQ04759 706 aa19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 OLIG2Q13516 323 aa19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 DCLRE1AQ6PJP8 1040 aa19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 XKR5Q6UX68 686 aa19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 ZBTB8OSQ8IWT0 167 aa19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 CENPSQ8N2Z9 138 aa19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 RNF149Q8NC42 400 aa19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 PBXIP1Q96AQ6 731 aa19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 NPLQ9BXD5 320 aaPredicted RBP19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 LRRC40Q9H9A6 602 aa19.58■□□□□ 0.73
SNAPC3-206ENST00000490969 A0A1W2PPW3 197 aa19.58■□□□□ 0.72
SNAPC3-206ENST00000490969 XPOTO43592 962 aaKnown RBP19.58■□□□□ 0.72
SNAPC3-206ENST00000490969 MAFO75444 373 aaPredicted RBP19.58■□□□□ 0.72
SNAPC3-206ENST00000490969 INHBBP09529 407 aa19.58■□□□□ 0.72
SNAPC3-206ENST00000490969 HUNKP57058 714 aa19.58■□□□□ 0.72
SNAPC3-206ENST00000490969 GOLGA7BQ2TAP0 167 aa19.58■□□□□ 0.72
SNAPC3-206ENST00000490969 OGFOD2Q6N063 350 aa19.58■□□□□ 0.72
SNAPC3-206ENST00000490969 NETO2Q8NC67 525 aa19.58■□□□□ 0.72
SNAPC3-206ENST00000490969 ZNF420Q8TAQ5 688 aaPredicted RBP19.58■□□□□ 0.72
SNAPC3-206ENST00000490969 SGF29Q96ES7 293 aa19.58■□□□□ 0.72
SNAPC3-206ENST00000490969 P2RY11Q96G91 374 aa19.58■□□□□ 0.72
SNAPC3-206ENST00000490969 SLX1AQ9BQ83 275 aa19.58■□□□□ 0.72
SNAPC3-206ENST00000490969 SEPT10Q9P0V9 454 aa19.58■□□□□ 0.72
SNAPC3-206ENST00000490969 K7EPI3 171 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 TIMM44O43615 452 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 UGT1A6P19224 532 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 UGT1A1P22309 533 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 UGT1A4P22310 534 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 UGT1A3P35503 534 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 UGT1A5P35504 534 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 EEF1DP3Q658K8 133 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 NANOGP8Q6NSW7 305 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 C12orf29Q8N999 325 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 OR52K1Q8NGK4 314 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 DOK1Q99704 481 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 HNRNPABQ99729 332 aaKnown RBP19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 RPF1Q9H9Y2 349 aaKnown RBP19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 PTPRHQ9HD43 1115 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 NRBP2Q9NSY0 501 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 SMOXQ9NWM0 555 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 CACNA2D2Q9NY47 1150 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 PLXNA1Q9UIW2 1896 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 ADAM23O75077 832 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 BMP2P12643 396 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 GOT1P17174 413 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 LAMTOR4Q0VGL1 99 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 LRP8Q14114 963 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 ATF7IP2Q5U623 682 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 GPR107Q5VW38 600 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 C16orf87Q6PH81 154 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 ARMCX2Q7L311 632 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 CXorf38Q8TB03 319 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 TUT1Q9H6E5 874 aaKnown RBP19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 SARDHQ9UL12 918 aa19.57■□□□□ 0.72
SNAPC3-206ENST00000490969 PLXNB2O15031 1838 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 ZCWPW2A0A1B0GU75 182 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 TRIM64A6NGJ6 449 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 TMEM233B4DJY2 109 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 MFSD11O43934 449 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 CLASP2O75122 1294 aaKnown RBP19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 IL18RAPO95256 599 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 CD247P20963 164 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 MYF6P23409 242 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 DCKP27707 260 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 GLRBP48167 497 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 FKBP1BP68106 108 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 STX5Q13190 355 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 PMS2P3Q13401 168 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 DGKDQ16760 1214 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 DCAF6Q58WW2 860 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 FGD3Q5JSP0 725 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 AARS2Q5JTZ9 985 aaKnown RBP19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 C6orf10Q5SRN2 563 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 METTL7BQ6UX53 244 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 KDM1BQ8NB78 822 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 VPS39Q96JC1 886 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 SCYL1Q96KG9 808 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 TCF12Q99081 682 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 GPATCH1Q9BRR8 931 aaKnown RBP19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 SPAG4Q9NPE6 437 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 GTF2IRD1Q9UHL9 959 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 SLC39A10Q9ULF5 831 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 SNX9Q9Y5X1 595 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 TMEM247A6NEH6 219 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 SOBPA7XYQ1 873 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 ZNF839A8K0R7 811 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 SDHDO14521 159 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 TMEM132AQ24JP5 1023 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 ZNF792Q3KQV3 632 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 REP15Q6BDI9 236 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 TMEM135Q86UB9 458 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 CCDC185Q8N715 623 aa19.56■□□□□ 0.72
SNAPC3-206ENST00000490969 MAELQ96JY0 434 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms