RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 FBXO47Q5MNV8 452 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 TFAP2DQ7Z6R9 452 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 P3H2Q8IVL5 708 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 SFRP1Q8N474 314 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 TRPC4APQ8TEL6 797 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 PPP1R10Q96QC0 940 aaKnown RBP12.97□□□□□ -0.33
SHOX2-205ENST00000490689 KCTD15Q96SI1 283 aaPredicted RBP12.97□□□□□ -0.33
SHOX2-205ENST00000490689 RBBP8Q99708 897 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 C20orf27Q9GZN8 174 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 IL22Q9GZX6 179 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 EURLQ9NYK6 297 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 RAD54BQ9Y620 910 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 TIAM2Q8IVF5 1701 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 SF3B1O75533 1304 aaKnown RBP eCLIP12.97□□□□□ -0.33
SHOX2-205ENST00000490689 FAM159BA6NKW6 160 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 E7ENX8 843 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 ZBTB14O43829 449 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 ZNF286BP0CG31 522 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 HGFP14210 728 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 CCR1P32246 355 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 RAB10P61026 200 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 GJC2Q5T442 439 aaPredicted RBP12.97□□□□□ -0.33
SHOX2-205ENST00000490689 TTC30AQ86WT1 665 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 ZDHHC13Q8IUH4 622 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 ZNF567Q8N184 647 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 HACL1Q9UJ83 578 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 A0A0J9YVX5 310 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 CLDN5O00501 218 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 ZBTB24O43167 697 aaPredicted RBP12.97□□□□□ -0.33
SHOX2-205ENST00000490689 CILPO75339 1184 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 ALDOAP04075 364 aaKnown RBP12.97□□□□□ -0.33
SHOX2-205ENST00000490689 FCGR1AP12314 374 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 NCK1P16333 377 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 ALDH4A1P30038 563 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 LIMK2P53671 638 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 VAC14Q08AM6 782 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 TMEM26Q6ZUK4 368 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 DENND6AQ8IWF6 608 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 WDTC1Q8N5D0 677 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 FNDC5Q8NAU1 212 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 HMG20AQ9NP66 347 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 ADAM28Q9UKQ2 775 aa12.97□□□□□ -0.33
SHOX2-205ENST00000490689 E7ESA3 106 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 CCL22O00626 93 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 KATNA1O75449 491 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 LINC00032P0C843 101 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 HSMCR30P0CW71 290 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 UGT1A6P19224 532 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 UGT1A1P22309 533 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 UGT1A4P22310 534 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 UGT1A3P35503 534 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 UGT1A5P35504 534 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 SQLEQ14534 574 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 LDB1Q86U70 411 aaPredicted RBP12.96□□□□□ -0.33
SHOX2-205ENST00000490689 ERI1Q8IV48 349 aaKnown RBP12.96□□□□□ -0.33
SHOX2-205ENST00000490689 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.96□□□□□ -0.33
SHOX2-205ENST00000490689 OR9I1Q8NGQ6 314 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 PSMA8Q8TAA3 256 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 AFG1LQ8WV93 481 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 ELMO1Q92556 727 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 RORBQ92753 470 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 ASPSCR1Q9BZE9 553 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 ASB7Q9H672 318 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 SETD4Q9NVD3 440 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 FAM50BQ9Y247 325 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 MTF2Q9Y483 593 aaPredicted RBP12.96□□□□□ -0.33
SHOX2-205ENST00000490689 BHMG1C9JSJ3 638 aaPredicted RBP12.96□□□□□ -0.33
SHOX2-205ENST00000490689 KCNH1O95259 989 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 ZNF682O95780 498 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 ASPAP45381 313 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 GEMP55040 296 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 RSBN1Q5VWQ0 802 aaPredicted RBP12.96□□□□□ -0.33
SHOX2-205ENST00000490689 KLHL35Q6PF15 583 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 SPESP1Q6UW49 350 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 OTOP3Q7RTS5 596 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 FAM126BQ8IXS8 530 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 NIPA2Q8N8Q9 360 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 DCBLD1Q8N8Z6 715 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 TERB1Q8NA31 727 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 OSMRQ99650 979 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 ADI1Q9BV57 179 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 APOL5Q9BWW9 433 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 TMPRSS4Q9NRS4 437 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 RGS18Q9NS28 235 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 ZDHHC2Q9UIJ5 367 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 FBXO5Q9UKT4 447 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 ANKRD6Q9Y2G4 727 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 U3KQV3 271 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 N4BP2Q86UW6 1770 aaPredicted RBP12.96□□□□□ -0.33
SHOX2-205ENST00000490689 ROBO1Q9Y6N7 1651 aa12.96□□□□□ -0.33
SHOX2-205ENST00000490689 USP17L7P0C7H9 530 aa12.96□□□□□ -0.34
SHOX2-205ENST00000490689 PRKCHP24723 683 aa12.96□□□□□ -0.34
SHOX2-205ENST00000490689 GPD2P43304 727 aa12.96□□□□□ -0.34
SHOX2-205ENST00000490689 CXCL9Q07325 125 aa12.96□□□□□ -0.34
SHOX2-205ENST00000490689 OGFOD2Q6N063 350 aa12.96□□□□□ -0.34
SHOX2-205ENST00000490689 CUZD1Q86UP6 607 aa12.96□□□□□ -0.34
SHOX2-205ENST00000490689 SYTL1Q8IYJ3 562 aa12.96□□□□□ -0.34
SHOX2-205ENST00000490689 PTGR2Q8N8N7 351 aaPredicted RBP12.96□□□□□ -0.34
SHOX2-205ENST00000490689 OSCP1Q8WVF1 389 aa12.96□□□□□ -0.34
SHOX2-205ENST00000490689 BBS2Q9BXC9 721 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms