RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 TAS2R40P59535 323 aa18.42■□□□□ 0.54
COL9A3-214ENST00000490398 RACK1P63244 317 aaKnown RBP18.42■□□□□ 0.54
COL9A3-214ENST00000490398 ACAP1Q15027 740 aa18.42■□□□□ 0.54
COL9A3-214ENST00000490398 MYLK3Q32MK0 819 aa18.42■□□□□ 0.54
COL9A3-214ENST00000490398 POLNQ7Z5Q5 900 aa18.42■□□□□ 0.54
COL9A3-214ENST00000490398 PLPP6Q8IY26 295 aa18.42■□□□□ 0.54
COL9A3-214ENST00000490398 TRIM5Q9C035 493 aa18.42■□□□□ 0.54
COL9A3-214ENST00000490398 CAAP1Q9H8G2 361 aa18.42■□□□□ 0.54
COL9A3-214ENST00000490398 PCDH18Q9HCL0 1135 aa18.42■□□□□ 0.54
COL9A3-214ENST00000490398 CTTNBP2NLQ9P2B4 639 aa18.42■□□□□ 0.54
COL9A3-214ENST00000490398 EIF3CLB5ME19 914 aaKnown RBP18.41■□□□□ 0.54
COL9A3-214ENST00000490398 KRIT1O00522 736 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 AKR1B10O60218 316 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 SH3BP5O60239 455 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 PRAMEF11O60813 436 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 UGT2B4P06133 528 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 ADRB1P08588 477 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 PRLRP16471 622 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 ITIH2P19823 946 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 CSRP1P21291 193 aaKnown RBP18.41■□□□□ 0.54
COL9A3-214ENST00000490398 IL4RP24394 825 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 RGRP47804 291 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 MMRN1Q13201 1228 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 BOLA3Q53S33 107 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 LRRC73Q5JTD7 316 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 SEL1L3Q68CR1 1132 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 TRIM69Q86WT6 500 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 TC2NQ8N9U0 490 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 TSC1Q92574 1164 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 SERAC1Q96JX3 654 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 NSMCE3Q96MG7 304 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 CSPG4P5Q96PW8 444 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 EIF3CQ99613 913 aaKnown RBP18.41■□□□□ 0.54
COL9A3-214ENST00000490398 MYOCQ99972 504 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 ZDHHC5Q9C0B5 715 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 KDM4CQ9H3R0 1056 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 DEF6Q9H4E7 631 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 FZD3Q9NPG1 666 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 AASDHPPTQ9NRN7 309 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 KLHL11Q9NVR0 708 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 ZNHIT6Q9NWK9 470 aaKnown RBP18.41■□□□□ 0.54
COL9A3-214ENST00000490398 GGT7Q9UJ14 662 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 ITM2BQ9Y287 266 aa18.41■□□□□ 0.54
COL9A3-214ENST00000490398 KNL1Q8NG31 2342 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 ZSCAN5CA6NGD5 496 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-214ENST00000490398 C16orf96A6NNT2 1141 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 AKR1B15C9JRZ8 316 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-214ENST00000490398 H0Y8X5 98 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 MYO1FO00160 1098 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 DFFAO00273 331 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 PROSCO94903 275 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 H2AFZP0C0S5 128 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 ADRB3P13945 408 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 ITGB7P26010 798 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 GJC1P36383 396 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 SSR1P43307 286 aaKnown RBP18.4■□□□□ 0.54
COL9A3-214ENST00000490398 HCAR3P49019 387 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 ARSEP51690 589 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 GEMIN4P57678 1058 aaKnown RBP18.4■□□□□ 0.54
COL9A3-214ENST00000490398 RHOAP61586 193 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 IL9RQ01113 521 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 FOXK2Q01167 660 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 ZNF284Q2VY69 593 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 INO80DQ53TQ3 878 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-214ENST00000490398 H2AFVQ71UI9 128 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 CTNNBL1Q8WYA6 563 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-214ENST00000490398 KLHL32Q96NJ5 620 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 NCAPGQ9BPX3 1015 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 PREBQ9HCU5 417 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 DYRK4Q9NR20 520 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 UBA2Q9UBT2 640 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-214ENST00000490398 FADS3Q9Y5Q0 445 aa18.4■□□□□ 0.54
COL9A3-214ENST00000490398 SPAARA0A1B0GVQ0 90 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 TMEM110-MUSTN1A8MSY1 372 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 UPK3BL1B0FP48 263 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 UPK3BL2E5RIL1 263 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 H3BRJ5 948 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 MUSKO15146 869 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 VILLO15195 856 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 SLC31A1O15431 190 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 TMEM253P0C7T8 217 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 CD38P28907 300 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 ZNF75DP51815 510 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 NEK3P51956 506 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 SNRPD1P62314 119 aaKnown RBP18.39■□□□□ 0.53
COL9A3-214ENST00000490398 FGL2Q14314 439 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 SHBQ15464 509 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 TEAD4Q15561 434 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 NAPEPLDQ6IQ20 393 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 ADAT2Q7Z6V5 191 aaKnown RBP18.39■□□□□ 0.53
COL9A3-214ENST00000490398 PRPF39Q86UA1 669 aaKnown RBP18.39■□□□□ 0.53
COL9A3-214ENST00000490398 HORMAD1Q86X24 394 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 SPATS2Q86XZ4 545 aaKnown RBP18.39■□□□□ 0.53
COL9A3-214ENST00000490398 TSEN2Q8NCE0 465 aaKnown RBP18.39■□□□□ 0.53
COL9A3-214ENST00000490398 TEKT4Q8WW24 435 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 CCDC42Q96M95 316 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 GDAP1L1Q96MZ0 367 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 TM7SF3Q9NS93 570 aa18.39■□□□□ 0.53
COL9A3-214ENST00000490398 ARHGAP42A6NI28 874 aa18.38■□□□□ 0.53
COL9A3-214ENST00000490398 PCDH8O95206 1070 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms