RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 KLK6Q92876 244 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 BMFQ96LC9 184 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 MYOCQ99972 504 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 CNPY3Q9BT09 278 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 RETREG1Q9H6L5 497 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 TMEM51Q9NW97 253 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 KLF15Q9UIH9 416 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 TPX2Q9ULW0 747 aaKnown RBP12.03□□□□□ -0.48
SRSF4-204ENST00000489898 MFHAS1Q9Y4C4 1052 aa12.03□□□□□ -0.48
SRSF4-204ENST00000489898 KNTC1P50748 2209 aa12.02□□□□□ -0.48
SRSF4-204ENST00000489898 TBC1D3DA0A087WVF3 549 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 TBC1D3IA0A087WXS9 549 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 TBC1D3EA0A087X179 549 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 TBC1D3KA0A087X1G2 549 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 TSPAN11A1L157 253 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 TMEM8BA6NDV4 472 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 TBC1D3FA6NER0 549 aaPredicted RBP12.02□□□□□ -0.49
SRSF4-204ENST00000489898 POM121BA6NF01 834 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 TMEM191CA6NGB0 347 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 TBC1D3LB9A6J9 549 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 TRIM38O00635 465 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 INSIG1O15503 277 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 BNIP3LO60238 219 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 LRCH4O75427 683 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 TMCC1O94876 653 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 GSRP00390 522 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 PRNPP04156 253 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 TBC1D3HP0C7X1 549 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 GM2AP17900 193 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 IL1R2P27930 398 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 NNMTP40261 264 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 CLDN2P57739 230 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 SERINC3Q13530 473 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 NR1I3Q14994 352 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 CARD16Q5EG05 197 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 FIGNQ5HY92 759 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 LRRC73Q5JTD7 316 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 ATXN7L2Q5T6C5 722 aaPredicted RBP12.02□□□□□ -0.49
SRSF4-204ENST00000489898 FAM46CQ5VWP2 391 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 TBC1D3GQ6DHY5 549 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 TXNRD3NBQ6F5E7 133 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 TBC1D3CQ6IPX1 549 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 KYAT3Q6YP21 454 aaKnown RBP12.02□□□□□ -0.49
SRSF4-204ENST00000489898 TBC1D3Q8IZP1 549 aaPredicted RBP12.02□□□□□ -0.49
SRSF4-204ENST00000489898 OR2AP1Q8NGE2 309 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 SETD7Q8WTS6 366 aaKnown RBP12.02□□□□□ -0.49
SRSF4-204ENST00000489898 KCTD15Q96SI1 283 aaPredicted RBP12.02□□□□□ -0.49
SRSF4-204ENST00000489898 SNRNP25Q9BV90 132 aaKnown RBP12.02□□□□□ -0.49
SRSF4-204ENST00000489898 SELENOOQ9BVL4 669 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 MAGEH1Q9H213 219 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 HAUS4Q9H6D7 363 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 AASDHPPTQ9NRN7 309 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 UCKL1Q9NWZ5 548 aa12.02□□□□□ -0.49
SRSF4-204ENST00000489898 CACNA1GO43497 2377 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 MUSKO15146 869 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 CASC3O15234 703 aaKnown RBP12.01□□□□□ -0.49
SRSF4-204ENST00000489898 TNFSF14O43557 240 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 KDELR3O43731 214 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 RAMP2O60895 175 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 PEX11BO96011 259 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 ITIH2P19823 946 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 IGFALSP35858 605 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 NUDT1P36639 197 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 NEK3P51956 506 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 DPYSQ14117 519 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 SETMARQ53H47 684 aaPredicted RBP12.01□□□□□ -0.49
SRSF4-204ENST00000489898 KCTD16Q68DU8 428 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 RETSATQ6NUM9 610 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 NEK5Q6P3R8 708 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 FBXL19Q6PCT2 694 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 ARHGAP36Q6ZRI8 547 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 TMC6Q7Z403 805 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 SLFN11Q7Z7L1 901 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 CPNE8Q86YQ8 564 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 RHBDD1Q8TEB9 315 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 FNIP1Q8TF40 1166 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 PPP1R9BQ96SB3 815 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 CDC6Q99741 560 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 HEPHQ9BQS7 1158 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 SPON2Q9BUD6 331 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 C1QTNF2Q9BXJ5 285 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 ISCUQ9H1K1 167 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 CBX8Q9HC52 389 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 GDF3Q9NR23 364 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 DKK4Q9UBT3 224 aa12.01□□□□□ -0.49
SRSF4-204ENST00000489898 TENM4Q6N022 2769 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 SYCE3A1L190 88 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 FAM149AA5PLN7 773 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 RASA4BC9J798 803 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 PRAMEF26H0Y7S4 382 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 J3KR12 359 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 SLC31A1O15431 190 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 RASA4O43374 803 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 DFNA5O60443 496 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 SDC3O75056 442 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 GYPCP04921 128 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 THEGLP0DJG4 465 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 HNRNPA2B1P22626 353 aaKnown RBP12□□□□□ -0.49
SRSF4-204ENST00000489898 ZNF165P49910 485 aa12□□□□□ -0.49
SRSF4-204ENST00000489898 AIF1P55008 147 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms