RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 DNAAF1Q8NEP3 725 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 TMEM163Q8TC26 289 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 RUFY2Q8WXA3 655 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 EYA3Q99504 573 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 SF3B5Q9BWJ5 86 aaKnown RBP5.49□□□□□ -1.53
CCDC39-206ENST00000489868 HIPK2Q9H2X6 1198 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 PLK2Q9NYY3 685 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 MYO6Q9UM54 1294 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 CNPY2Q9Y2B0 182 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 PABPN1LA6NDY0 278 aaKnown RBP5.48□□□□□ -1.53
CCDC39-206ENST00000489868 CBY3A6NI87 242 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 PROB1E7EW31 1015 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 CEP104O60308 925 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 EIF3JO75822 258 aaKnown RBP5.48□□□□□ -1.53
CCDC39-206ENST00000489868 MMP3P08254 477 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 CDC25AP30304 524 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 CENPAP49450 140 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 CXCR3P49682 368 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 TBL3Q12788 808 aaKnown RBP5.48□□□□□ -1.53
CCDC39-206ENST00000489868 BIRC3Q13489 604 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 MYBPC2Q14324 1141 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 MOB3CQ70IA8 216 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 PRSS45Q7RTY3 260 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 TMC8Q8IU68 726 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 FBXL14Q8N1E6 418 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 MCPH1Q8NEM0 835 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 GDPD5Q8WTR4 605 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 NEUROG1Q92886 237 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 MAELQ96JY0 434 aaKnown RBP5.48□□□□□ -1.53
CCDC39-206ENST00000489868 LBHD1Q9BQE6 289 aaPredicted RBP5.48□□□□□ -1.53
CCDC39-206ENST00000489868 ZPBPQ9BS86 351 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 ENTPD7Q9NQZ7 604 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 FZD10Q9ULW2 581 aa5.48□□□□□ -1.53
CCDC39-206ENST00000489868 A0A096LPK6 155 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 C17orf113A0A1B0GUU1 675 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 ACAA1P09110 424 aaPredicted RBP5.47□□□□□ -1.53
CCDC39-206ENST00000489868 EDN2P20800 178 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 TNFRSF8P28908 595 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 GPR12P47775 334 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 CCT5P48643 541 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 PCYT1AP49585 367 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 CRYZQ08257 329 aaKnown RBP5.47□□□□□ -1.53
CCDC39-206ENST00000489868 CAPSQ13938 189 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 TAF12Q16514 161 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 TMEM95Q3KNT9 176 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 RETSATQ6NUM9 610 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 CHD1LQ86WJ1 897 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 SMC5Q8IY18 1101 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 CPXM2Q8N436 756 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 PLD5Q8N7P1 536 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 MIGA1Q8NAN2 632 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 RFWD2Q8NHY2 731 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 TMEM170AQ8WVE7 144 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 SH3KBP1Q96B97 665 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 GFM1Q96RP9 751 aaKnown RBP5.47□□□□□ -1.53
CCDC39-206ENST00000489868 YME1L1Q96TA2 773 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 GPR63Q9BZJ6 419 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 ALKBH4Q9NXW9 302 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 SUFUQ9UMX1 484 aa5.47□□□□□ -1.53
CCDC39-206ENST00000489868 RRN3P2A6NIE6 340 aa5.46□□□□□ -1.54
CCDC39-206ENST00000489868 EYA2O00167 538 aa5.46□□□□□ -1.54
CCDC39-206ENST00000489868 NCAM2O15394 837 aa5.46□□□□□ -1.54
CCDC39-206ENST00000489868 HOXD3P31249 432 aaPredicted RBP5.46□□□□□ -1.54
CCDC39-206ENST00000489868 MLH1P40692 756 aa5.46□□□□□ -1.54
CCDC39-206ENST00000489868 PPM1FP49593 454 aaPredicted RBP5.46□□□□□ -1.54
CCDC39-206ENST00000489868 FAM27E3Q08E93 113 aa5.46□□□□□ -1.54
CCDC39-206ENST00000489868 SHBQ15464 509 aa5.46□□□□□ -1.54
CCDC39-206ENST00000489868 FSCBQ5H9T9 825 aa5.46□□□□□ -1.54
CCDC39-206ENST00000489868 IL20RBQ6UXL0 311 aa5.46□□□□□ -1.54
CCDC39-206ENST00000489868 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.46□□□□□ -1.54
CCDC39-206ENST00000489868 ADGRG6Q86SQ4 1221 aa5.46□□□□□ -1.54
CCDC39-206ENST00000489868 CPXCR1Q8N123 301 aa5.46□□□□□ -1.54
CCDC39-206ENST00000489868 TBC1D22AQ8WUA7 517 aa5.46□□□□□ -1.54
CCDC39-206ENST00000489868 ZBTB10Q96DT7 871 aa5.46□□□□□ -1.54
CCDC39-206ENST00000489868 PSMD1Q99460 953 aa5.46□□□□□ -1.54
CCDC39-206ENST00000489868 CD180Q99467 661 aa5.46□□□□□ -1.54
CCDC39-206ENST00000489868 CLK4Q9HAZ1 481 aaKnown RBP5.46□□□□□ -1.54
CCDC39-206ENST00000489868 HIF1ANQ9NWT6 349 aa5.46□□□□□ -1.54
CCDC39-206ENST00000489868 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.45□□□□□ -1.54
CCDC39-206ENST00000489868 IFNL4K9M1U5 179 aa5.45□□□□□ -1.54
CCDC39-206ENST00000489868 VWA5AO00534 786 aa5.45□□□□□ -1.54
CCDC39-206ENST00000489868 SLC28A2O43868 658 aa5.45□□□□□ -1.54
CCDC39-206ENST00000489868 URODP06132 367 aa5.45□□□□□ -1.54
CCDC39-206ENST00000489868 PYGLP06737 847 aa5.45□□□□□ -1.54
CCDC39-206ENST00000489868 HOXC6P09630 235 aa5.45□□□□□ -1.54
CCDC39-206ENST00000489868 ITGB8P26012 769 aa5.45□□□□□ -1.54
CCDC39-206ENST00000489868 TKTP29401 623 aaKnown RBP5.45□□□□□ -1.54
CCDC39-206ENST00000489868 RYKP34925 604 aa5.45□□□□□ -1.54
CCDC39-206ENST00000489868 MAPK9P45984 424 aa5.45□□□□□ -1.54
CCDC39-206ENST00000489868 PDLIM4P50479 330 aa5.45□□□□□ -1.54
CCDC39-206ENST00000489868 EFNA5P52803 228 aa5.45□□□□□ -1.54
CCDC39-206ENST00000489868 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.45□□□□□ -1.54
CCDC39-206ENST00000489868 TRAF3Q13114 568 aa5.45□□□□□ -1.54
CCDC39-206ENST00000489868 CTTNQ14247 550 aaKnown RBP5.45□□□□□ -1.54
CCDC39-206ENST00000489868 LPIN1Q14693 890 aa5.45□□□□□ -1.54
CCDC39-206ENST00000489868 ZRSR2Q15696 482 aaKnown RBP5.45□□□□□ -1.54
CCDC39-206ENST00000489868 ZNF585BQ52M93 769 aa5.45□□□□□ -1.54
CCDC39-206ENST00000489868 TMTC1Q8IUR5 882 aa5.45□□□□□ -1.54
CCDC39-206ENST00000489868 ADAMTS15Q8TE58 950 aa5.45□□□□□ -1.54
CCDC39-206ENST00000489868 NTPCRQ9BSD7 190 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms