RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 GDI1P31150 447 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 ELK3P41970 407 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 RGRP47804 291 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 RHOAP61586 193 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 SULT2A1Q06520 285 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 RUNX3Q13761 415 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 SKIV2LQ15477 1246 aaKnown RBP21.17■□□□□ 0.98
SND1-214ENST00000489417 SLC14A2Q15849 920 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 CCDC38Q502W7 563 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 UBAP2Q5T6F2 1119 aaKnown RBP21.17■□□□□ 0.98
SND1-214ENST00000489417 DENND2CQ68D51 928 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 GPR153Q6NV75 609 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 C12orf40Q86WS4 652 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 AGGF1Q8N302 714 aaeCLIP21.17■□□□□ 0.98
SND1-214ENST00000489417 FBXO36Q8NEA4 188 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 WFIKKN2Q8TEU8 576 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 LRRC39Q96DD0 335 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 MRGPRX2Q96LB1 330 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 WDR83Q9BRX9 315 aaKnown RBP21.17■□□□□ 0.98
SND1-214ENST00000489417 SLC25A13Q9UJS0 675 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 CHMP2BQ9UQN3 213 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 PLAAQ9Y263 795 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 TEX264Q9Y6I9 313 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 MYO18AQ92614 2054 aaKnown RBP21.16■□□□□ 0.98
SND1-214ENST00000489417 OTOL1A6NHN0 477 aaPredicted RBP21.16■□□□□ 0.98
SND1-214ENST00000489417 K7ERQ8 282 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 AP3B1O00203 1094 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 MBTPS2O43462 519 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 TULP3O75386 442 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 ACSL3O95573 720 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 SP100P23497 879 aaPredicted RBP21.16■□□□□ 0.98
SND1-214ENST00000489417 ADRA1AP35348 466 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 CTSOP43234 321 aaPredicted RBP21.16■□□□□ 0.98
SND1-214ENST00000489417 SESN2P58004 480 aaPredicted RBP21.16■□□□□ 0.98
SND1-214ENST00000489417 HTR4Q13639 388 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 IHHQ14623 411 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 MBLAC2Q68D91 279 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 ADIPOR2Q86V24 386 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 IQCKQ8N0W5 287 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 DNAAF3Q8N9W5 541 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 ATP11CQ8NB49 1132 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 TTC17Q96AE7 1141 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 EXOC2Q96KP1 924 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 SIGLEC10Q96LC7 697 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 NUDCD1Q96RS6 583 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 APOL2Q9BQE5 337 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 RPP25Q9BUL9 199 aaKnown RBP21.16■□□□□ 0.98
SND1-214ENST00000489417 TRMT61BQ9BVS5 477 aaKnown RBP21.16■□□□□ 0.98
SND1-214ENST00000489417 FSD1LQ9BXM9 530 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 ACBD3Q9H3P7 528 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 SCUBE2Q9NQ36 999 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 SLC27A6Q9Y2P4 619 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.16■□□□□ 0.98
SND1-214ENST00000489417 NUMBLQ9Y6R0 609 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 MYOFQ9NZM1 2061 aa21.16■□□□□ 0.98
SND1-214ENST00000489417 ANHXE9PGG2 379 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 INSIG1O15503 277 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 GJB3O75712 270 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 CPP00450 1065 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 AGTP01019 485 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 SERPINF2P08697 491 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 FOSL2P15408 326 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 POLR2EP19388 210 aaKnown RBP21.15■□□□□ 0.98
SND1-214ENST00000489417 SCNN1BP51168 640 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 ECT2LQ008S8 904 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 NSUN2Q08J23 767 aaKnown RBP eCLIP21.15■□□□□ 0.98
SND1-214ENST00000489417 SLC29A2Q14542 456 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 PCSK7Q16549 785 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 GEN1Q17RS7 908 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 GRAMD4Q6IC98 578 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 IGDCC3Q8IVU1 814 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 ZIM3Q96PE6 472 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 NOD2Q9HC29 1040 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 PIH1D1Q9NWS0 290 aaKnown RBP21.15■□□□□ 0.98
SND1-214ENST00000489417 HS3ST2Q9Y278 367 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 REV3LO60673 3130 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 COL4A3Q01955 1670 aa21.15■□□□□ 0.98
SND1-214ENST00000489417 SDR42E2A6NKP2 422 aa21.14■□□□□ 0.98
SND1-214ENST00000489417 SMAD6O43541 496 aaKnown RBP21.14■□□□□ 0.98
SND1-214ENST00000489417 NUDT17P0C025 328 aa21.14■□□□□ 0.98
SND1-214ENST00000489417 SRCP12931 536 aa21.14■□□□□ 0.98
SND1-214ENST00000489417 TSHRP16473 764 aa21.14■□□□□ 0.98
SND1-214ENST00000489417 MGAT1P26572 445 aa21.14■□□□□ 0.98
SND1-214ENST00000489417 SLC6A11P48066 632 aa21.14■□□□□ 0.98
SND1-214ENST00000489417 STK19P49842 368 aaPredicted RBP21.14■□□□□ 0.98
SND1-214ENST00000489417 CDH17Q12864 832 aa21.14■□□□□ 0.98
SND1-214ENST00000489417 TMEM215Q68D42 235 aa21.14■□□□□ 0.98
SND1-214ENST00000489417 LRIG3Q6UXM1 1119 aa21.14■□□□□ 0.98
SND1-214ENST00000489417 RNF135Q8IUD6 432 aa21.14■□□□□ 0.98
SND1-214ENST00000489417 PALM2Q8IXS6 379 aa21.14■□□□□ 0.98
SND1-214ENST00000489417 MPP5Q8N3R9 675 aa21.14■□□□□ 0.98
SND1-214ENST00000489417 RPL10LQ96L21 214 aaKnown RBP21.14■□□□□ 0.98
SND1-214ENST00000489417 GUCD1Q96NT3 240 aa21.14■□□□□ 0.98
SND1-214ENST00000489417 BFARQ9NZS9 450 aa21.14■□□□□ 0.98
SND1-214ENST00000489417 DEC1Q9P2X7 70 aa21.14■□□□□ 0.98
SND1-214ENST00000489417 ABHD2P08910 425 aa21.13■□□□□ 0.97
SND1-214ENST00000489417 NPY2RP49146 381 aa21.13■□□□□ 0.97
SND1-214ENST00000489417 FAM193AP78312 1265 aa21.13■□□□□ 0.97
SND1-214ENST00000489417 RALGPS1Q5JS13 557 aa21.13■□□□□ 0.97
SND1-214ENST00000489417 DENND5AQ6IQ26 1287 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms