RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 ZDHHC6Q9H6R6 413 aa9.54□□□□□ -0.88
SNX17-207ENST00000489402 POLR1BQ9H9Y6 1135 aa9.54□□□□□ -0.88
SNX17-207ENST00000489402 THSD1Q9NS62 852 aa9.54□□□□□ -0.88
SNX17-207ENST00000489402 GPR27Q9NS67 375 aa9.54□□□□□ -0.88
SNX17-207ENST00000489402 FADS3Q9Y5Q0 445 aa9.54□□□□□ -0.88
SNX17-207ENST00000489402 CSNK1G3Q9Y6M4 447 aa9.54□□□□□ -0.88
SNX17-207ENST00000489402 CXorf51AA0A1B0GTR3 108 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 CPED1A4D0V7 1026 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 POM121BA6NF01 834 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 ERVH48-1M5A8F1 160 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 PES1O00541 588 aaKnown RBP9.53□□□□□ -0.88
SNX17-207ENST00000489402 AQP9O43315 295 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 TSPAN6O43657 245 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 ZMPSTE24O75844 475 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 C1QL1O75973 258 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 NEBLO76041 1014 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 LSM8O95777 96 aaKnown RBP9.53□□□□□ -0.88
SNX17-207ENST00000489402 JUNDP17535 347 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 FLT3P36888 993 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 ARF5P84085 180 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 RHDQ02161 417 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 PDE1CQ14123 709 aaPredicted RBP9.53□□□□□ -0.88
SNX17-207ENST00000489402 FZD2Q14332 565 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 POLD3Q15054 466 aaPredicted RBP9.53□□□□□ -0.88
SNX17-207ENST00000489402 CDKN3Q16667 212 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 ARL13BQ3SXY8 428 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 TAF3Q5VWG9 929 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 PARS2Q7L3T8 475 aaKnown RBP9.53□□□□□ -0.88
SNX17-207ENST00000489402 FAM131BQ86XD5 332 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 MLKLQ8NB16 471 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 TPCN2Q8NHX9 752 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 BTN2A2Q8WVV5 523 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 GLMNQ92990 594 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 VOPP1Q96AW1 172 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 ISG20Q96AZ6 181 aaKnown RBP9.53□□□□□ -0.88
SNX17-207ENST00000489402 GRAMD1AQ96CP6 724 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 ARHGEF26Q96DR7 871 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 HIC2Q96JB3 615 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 BMFQ96LC9 184 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 CFAP57Q96MR6 1250 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 IL12RB2Q99665 862 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 TM6SF2Q9BZW4 377 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 NDST4Q9H3R1 872 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 HECAQ9UBI9 543 aaPredicted RBP9.53□□□□□ -0.88
SNX17-207ENST00000489402 PPARGC1AQ9UBK2 798 aaKnown RBP9.53□□□□□ -0.88
SNX17-207ENST00000489402 HPCAL4Q9UM19 191 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 FCF1Q9Y324 198 aaKnown RBP9.53□□□□□ -0.88
SNX17-207ENST00000489402 ASXL3Q9C0F0 2248 aa9.53□□□□□ -0.88
SNX17-207ENST00000489402 LY6G6EA0A0G2JKS1 128 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 IGLON5A6NGN9 336 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 KRIT1O00522 736 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 TPP1O14773 563 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 RAD51BO15315 384 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 ZNF821O75541 412 aaPredicted RBP9.52□□□□□ -0.89
SNX17-207ENST00000489402 RBMS1P29558 406 aaKnown RBP9.52□□□□□ -0.89
SNX17-207ENST00000489402 RPIAP49247 311 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 THOP1P52888 689 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 SNRPD1P62314 119 aaKnown RBP9.52□□□□□ -0.89
SNX17-207ENST00000489402 ATP11AP98196 1134 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 CFHR1Q03591 330 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 PTK2BQ14289 1009 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 FGL2Q14314 439 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 NR0B2Q15466 257 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 ISXQ2M1V0 245 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 VWA3BQ502W6 1294 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 HSP90AA4PQ58FG1 418 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 ZNF805Q5CZA5 627 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 C3orf38Q5JPI3 329 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 TPRG1LQ5T0D9 272 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 ARCQ7LC44 396 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 EFL1Q7Z2Z2 1120 aaKnown RBP9.52□□□□□ -0.89
SNX17-207ENST00000489402 PLPP6Q8IY26 295 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 COL27A1Q8IZC6 1860 aaPredicted RBP9.52□□□□□ -0.89
SNX17-207ENST00000489402 ZNF843Q8N446 348 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 DENND6BQ8NEG7 585 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 LMX1AQ8TE12 382 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 VCPIP1Q96JH7 1222 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 LENG8Q96PV6 779 aaPredicted RBP9.52□□□□□ -0.89
SNX17-207ENST00000489402 TUBGCP2Q9BSJ2 902 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 C1QTNF7Q9BXJ2 289 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 C1QTNF2Q9BXJ5 285 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 OSBPL1AQ9BXW6 950 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 DPH1Q9BZG8 443 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 RETREG1Q9H6L5 497 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 SPASTQ9UBP0 616 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 ZNF212Q9UDV6 495 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 SALL4Q9UJQ4 1053 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 SATB2Q9UPW6 733 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 U3KQA8 63 aa9.52□□□□□ -0.89
SNX17-207ENST00000489402 PTPRQQ9UMZ3 2332 aa9.51□□□□□ -0.89
SNX17-207ENST00000489402 EME2A4GXA9 379 aaPredicted RBP9.51□□□□□ -0.89
SNX17-207ENST00000489402 C16orf96A6NNT2 1141 aa9.51□□□□□ -0.89
SNX17-207ENST00000489402 MUSKO15146 869 aa9.51□□□□□ -0.89
SNX17-207ENST00000489402 KLK10O43240 276 aa9.51□□□□□ -0.89
SNX17-207ENST00000489402 LZTS3O60299 673 aaPredicted RBP9.51□□□□□ -0.89
SNX17-207ENST00000489402 TCEA3O75764 348 aa9.51□□□□□ -0.89
SNX17-207ENST00000489402 GSRP00390 522 aa9.51□□□□□ -0.89
SNX17-207ENST00000489402 UGT2B4P06133 528 aa9.51□□□□□ -0.89
SNX17-207ENST00000489402 PLA2G2AP14555 144 aa9.51□□□□□ -0.89
SNX17-207ENST00000489402 RHOQP17081 205 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms