RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 RING1Q06587 406 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 MRPL58Q14197 206 aaKnown RBP8.6□□□□□ -1.03
VTI1A-207ENST00000489357 COL19A1Q14993 1142 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 PAN2Q504Q3 1202 aaKnown RBP8.6□□□□□ -1.03
VTI1A-207ENST00000489357 FAM72AQ5TYM5 149 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 FAM72DQ6L9T8 149 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 ZNF280DQ6N043 979 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 FAM47EQ6ZV65 393 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 LRRTM3Q86VH5 581 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 FAM72BQ86X60 149 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 NDUFAF2Q8N183 169 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 UMODL1-AS1Q8N2C9 162 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 ATPAF2Q8N5M1 289 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 NPWQ8N729 165 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 RTL3Q8N8U3 475 aaKnown RBP8.6□□□□□ -1.03
VTI1A-207ENST00000489357 KLHL23Q8NBE8 558 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 STKLD1Q8NE28 680 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 ZSCAN18Q8TBC5 510 aaPredicted RBP8.6□□□□□ -1.03
VTI1A-207ENST00000489357 RDH11Q8TC12 318 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 NDRG1Q92597 394 aaKnown RBP8.6□□□□□ -1.03
VTI1A-207ENST00000489357 KLHL29Q96CT2 875 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 MRRFQ96E11 262 aaKnown RBP8.6□□□□□ -1.03
VTI1A-207ENST00000489357 SPATA17Q96L03 361 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 FAM111AQ96PZ2 611 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 INSM2Q96T92 566 aaPredicted RBP8.6□□□□□ -1.03
VTI1A-207ENST00000489357 IL12RB2Q99665 862 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 TMEM175Q9BSA9 504 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 TACO1Q9BSH4 297 aaKnown RBP8.6□□□□□ -1.03
VTI1A-207ENST00000489357 KIFC1Q9BW19 673 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 LMAN2LQ9H0V9 348 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 ECT2Q9H8V3 914 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 VPS45Q9NRW7 570 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 SLC17A7Q9P2U7 560 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 HSFX1Q9UBD0 423 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 SOX13Q9UN79 622 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 NEU3Q9UQ49 428 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 INPP5FQ9Y2H2 1132 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 RPS6KL1Q9Y6S9 549 aa8.6□□□□□ -1.03
VTI1A-207ENST00000489357 IGLV3-10A0A075B6K4 115 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 SYNJ2BP-COX16A0A087WUM0 186 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 HMX2A2RU54 273 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 KCNK1O00180 336 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 GRM6O15303 877 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 SNNO75324 88 aaPredicted RBP8.59□□□□□ -1.03
VTI1A-207ENST00000489357 PAGE1O75459 146 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 WFS1O76024 890 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 MAP3K6O95382 1288 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 BPGMP07738 259 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 ITGA2BP08514 1039 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 DLDP09622 509 aaKnown RBP8.59□□□□□ -1.03
VTI1A-207ENST00000489357 COL6A2P12110 1019 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 NQO1P15559 274 aaKnown RBP8.59□□□□□ -1.03
VTI1A-207ENST00000489357 RHOQP17081 205 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 PAMP19021 973 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 SLC11A1P49279 550 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 ELF3P78545 371 aaPredicted RBP8.59□□□□□ -1.03
VTI1A-207ENST00000489357 CLN3Q13286 438 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 MPP3Q13368 585 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 GPM6BQ13491 265 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 LAMB3Q13751 1172 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 HNRNPDQ14103 355 aaKnown RBP8.59□□□□□ -1.03
VTI1A-207ENST00000489357 KRT72Q14CN4 511 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 SNCBQ16143 134 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 CRTC2Q53ET0 693 aaPredicted RBP8.59□□□□□ -1.03
VTI1A-207ENST00000489357 FAM133BQ5BKY9 247 aaKnown RBP8.59□□□□□ -1.03
VTI1A-207ENST00000489357 PDPK2PQ6A1A2 396 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 TRMT10BQ6PF06 316 aaKnown RBP8.59□□□□□ -1.03
VTI1A-207ENST00000489357 NLRP9Q7RTR0 991 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 GALNT7Q86SF2 657 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 TMEM173Q86WV6 379 aaPredicted RBP8.59□□□□□ -1.03
VTI1A-207ENST00000489357 CNTN4Q8IWV2 1026 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 LMNTD2Q8IXW0 634 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 ABI1Q8IZP0 508 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 MPP5Q8N3R9 675 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 ATP6V0D2Q8N8Y2 350 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 DNAAF3Q8N9W5 541 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 GDPD5Q8WTR4 605 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 BCL7CQ8WUZ0 217 aaPredicted RBP8.59□□□□□ -1.03
VTI1A-207ENST00000489357 OVCA2Q8WZ82 227 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 EDEM1Q92611 657 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 PEX13Q92968 403 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 E2F7Q96AV8 911 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 MRPL38Q96DV4 380 aaKnown RBP8.59□□□□□ -1.03
VTI1A-207ENST00000489357 SLC39A13Q96H72 371 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 IGSF21Q96ID5 467 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 BTN2A3PQ96KV6 586 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 FCRL2Q96LA5 508 aaPredicted RBP8.59□□□□□ -1.03
VTI1A-207ENST00000489357 RMDN2Q96LZ7 410 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 RBBP8Q99708 897 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 VN1R3Q9BXE9 311 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 MAGEB5Q9BZ81 275 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 WWP1Q9H0M0 922 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 ARNT2Q9HBZ2 717 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 POLMQ9NP87 494 aaPredicted RBP8.59□□□□□ -1.03
VTI1A-207ENST00000489357 SLCO1B3Q9NPD5 702 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 ANLNQ9NQW6 1124 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 PRDM6Q9NQX0 595 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 SMYD2Q9NRG4 433 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 TMLHEQ9NVH6 421 aa8.59□□□□□ -1.03
VTI1A-207ENST00000489357 THAP1Q9NVV9 213 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms