RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 FOXO6A8MYZ6 492 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 INO80DQ53TQ3 878 aaPredicted RBP17.79■□□□□ 0.44
NPHP4-209ENST00000489180 PHF13Q86YI8 300 aaPredicted RBP17.79■□□□□ 0.44
NPHP4-209ENST00000489180 C12orf29Q8N999 325 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 OR7A2PQ8NGA2 310 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 REPS1Q96D71 796 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 EBNA1BP2Q99848 306 aaKnown RBP17.79■□□□□ 0.44
NPHP4-209ENST00000489180 ACSS3Q9H6R3 686 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 POLR1BQ9H9Y6 1135 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 SNX15Q9NRS6 342 aa17.79■□□□□ 0.44
NPHP4-209ENST00000489180 PSEN2P49810 448 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 RAB10P61026 200 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 CYP20A1Q6UW02 462 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 ZNF662Q6ZS27 426 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 GSTCDQ8NEC7 633 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 PRDM12Q9H4Q4 367 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 ACSS2Q9NR19 701 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 MARCH2Q9P0N8 246 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 KANSL3Q9P2N6 904 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 CDH9Q9ULB4 789 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 LYVE1Q9Y5Y7 322 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 KLHL18O94889 574 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 NPR3P17342 541 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 OAZ1P54368 228 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 HSPA14Q0VDF9 509 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 C9orf131Q5VYM1 1079 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 CAPSLQ8WWF8 208 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 REXO5Q96IC2 774 aaKnown RBP17.78■□□□□ 0.44
NPHP4-209ENST00000489180 IDI2Q9BXS1 227 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 ACE2Q9BYF1 805 aaPredicted RBP17.78■□□□□ 0.44
NPHP4-209ENST00000489180 TOR4AQ9NXH8 423 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 GGA2Q9UJY4 613 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 PCDHAC2Q9Y5I4 1007 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 FSCN2O14926 492 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 RTN3O95197 1032 aaPredicted RBP17.78■□□□□ 0.44
NPHP4-209ENST00000489180 AXLP30530 894 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 RXRGP48443 463 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 PRKAG1P54619 331 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 MAXP61244 160 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 GPR107Q5VW38 600 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 IZUMO1Q8IYV9 350 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 CDYL2Q8N8U2 506 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 FAM198AQ9UFP1 575 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 PRR5-ARHGAP8B1AHC4 643 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 CAPN1P07384 714 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 UMPSP11172 480 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 HGFP14210 728 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 DRG2P55039 364 aaKnown RBP17.78■□□□□ 0.44
NPHP4-209ENST00000489180 ARHGAP8P85298 464 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 PURAQ00577 322 aaKnown RBP17.78■□□□□ 0.44
NPHP4-209ENST00000489180 TNK2Q07912 1038 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 BROXQ5VW32 411 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 ABRAXAS1Q6UWZ7 409 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 ARCQ7LC44 396 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 CMC1Q7Z7K0 106 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 ZC3H7AQ8IWR0 971 aaKnown RBP17.78■□□□□ 0.44
NPHP4-209ENST00000489180 ST13P5Q8NFI4 369 aaPredicted RBP17.78■□□□□ 0.44
NPHP4-209ENST00000489180 OR52K2Q8NGK3 314 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 ABCB10Q9NRK6 738 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 UBAP1Q9NZ09 502 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 XPR1Q9UBH6 696 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 EGFL7Q9UHF1 273 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 KIAA1210Q9ULL0 1709 aa17.78■□□□□ 0.44
NPHP4-209ENST00000489180 BCLAF3A2AJT9 711 aaKnown RBP17.77■□□□□ 0.44
NPHP4-209ENST00000489180 SRRM3A6NNA2 597 aaPredicted RBP17.77■□□□□ 0.44
NPHP4-209ENST00000489180 ADM5C9JUS6 153 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 ADCY6O43306 1168 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 IL6P05231 212 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 GJB1P08034 283 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 ATP6V1C1P21283 382 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 GSTM5P46439 218 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 SRP54P61011 504 aaKnown RBP17.77■□□□□ 0.44
NPHP4-209ENST00000489180 RPL38P63173 70 aaKnown RBP17.77■□□□□ 0.44
NPHP4-209ENST00000489180 ELAVL2Q12926 359 aaKnown RBP17.77■□□□□ 0.44
NPHP4-209ENST00000489180 DACT2Q5SW24 774 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 LPCAT4Q643R3 524 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 KRT73Q86Y46 540 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 PPP1R14AQ96A00 147 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 NPAS2Q99743 824 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 CYP3A7-CYP3A51PA0A087WV96 503 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 CYP3A7P24462 503 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 PTSQ03393 145 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 TTC27Q6P3X3 843 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 TRABD2AQ86V40 505 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 COMMD2Q86X83 199 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 IL31RAQ8NI17 732 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 RP9Q8TA86 221 aaKnown RBP17.77■□□□□ 0.44
NPHP4-209ENST00000489180 FGFBP2Q9BYJ0 223 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 ARMC7Q9H6L4 198 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 ENOPH1Q9UHY7 261 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 SLC9A8Q9Y2E8 581 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 GMPPBQ9Y5P6 360 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 SPATA31C1P0DKV0 1188 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 GABRB2P47870 512 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 CAPSQ13938 189 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 UGCGQ16739 394 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 RGS21Q2M5E4 152 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 AP5B1Q2VPB7 878 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 PIGZQ86VD9 579 aa17.77■□□□□ 0.44
NPHP4-209ENST00000489180 HIPK1Q86Z02 1210 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms