RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 STAT4Q14765 748 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 HGSNATQ68CP4 663 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 FBXL19Q6PCT2 694 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 CYP4V2Q6ZWL3 525 aaPredicted RBP14.25□□□□□ -0.13
VTI1A-206ENST00000489142 HORMAD1Q86X24 394 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 MARCH9Q86YJ5 346 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 MFSD2AQ8NA29 543 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 GATA6Q92908 595 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 EXOC2Q96KP1 924 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 KCTD15Q96SI1 283 aaPredicted RBP14.25□□□□□ -0.13
VTI1A-206ENST00000489142 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.25□□□□□ -0.13
VTI1A-206ENST00000489142 TMEM121BQ9BXQ6 578 aaPredicted RBP14.25□□□□□ -0.13
VTI1A-206ENST00000489142 CATSPERBQ9H7T0 1116 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 IFNKQ9P0W0 207 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 IGF2RP11717 2491 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 PRAMEF26H0Y7S4 382 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 INSIG1O15503 277 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 GSRP00390 522 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 ITGAVP06756 1048 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 GZMAP12544 262 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 TCF4P15884 667 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 GRK6P43250 576 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 AIF1P55008 147 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 GEMIN4P57678 1058 aaKnown RBP14.24□□□□□ -0.13
VTI1A-206ENST00000489142 SNRPD1P62314 119 aaKnown RBP14.24□□□□□ -0.13
VTI1A-206ENST00000489142 SERINC3Q13530 473 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 FGL2Q14314 439 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 MYLK3Q32MK0 819 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 PPP6R3Q5H9R7 873 aaPredicted RBP14.24□□□□□ -0.13
VTI1A-206ENST00000489142 FIGNQ5HY92 759 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 PPP1R2P3Q6NXS1 205 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 KDM7AQ6ZMT4 941 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 GLRX5Q86SX6 157 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 EID2Q8N6I1 236 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 TMEM145Q8NBT3 493 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 OR2AP1Q8NGE2 309 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 SAP25Q8TEE9 199 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 VOPP1Q96AW1 172 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 ISG20Q96AZ6 181 aaKnown RBP14.24□□□□□ -0.13
VTI1A-206ENST00000489142 BTBD6Q96KE9 485 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 KLHL32Q96NJ5 620 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 CDC6Q99741 560 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 EDEM3Q9BZQ6 932 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 RETREG1Q9H6L5 497 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 FTSJ1Q9UET6 329 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 TPX2Q9ULW0 747 aaKnown RBP14.24□□□□□ -0.13
VTI1A-206ENST00000489142 DMTF1Q9Y222 760 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 APOBEC2Q9Y235 224 aaKnown RBP14.24□□□□□ -0.13
VTI1A-206ENST00000489142 NEUROG3Q9Y4Z2 214 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 FADS3Q9Y5Q0 445 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 LRRK1Q38SD2 2015 aa14.24□□□□□ -0.13
VTI1A-206ENST00000489142 COL5A1P20908 1838 aaPredicted RBP14.23□□□□□ -0.13
VTI1A-206ENST00000489142 C16orf96A6NNT2 1141 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 WASH4PA8MWX3 477 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 J3KR12 359 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 RAD51BO15315 384 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 FGF10O15520 208 aaPredicted RBP14.23□□□□□ -0.13
VTI1A-206ENST00000489142 SPINT1O43278 529 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 PRPSAP2O60256 369 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 RNF8O76064 485 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 TRIM16O95361 564 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 PROS1P07225 676 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 THEGLP0DJG4 465 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 ITIH2P19823 946 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 EPHA8P29322 1005 aaPredicted RBP14.23□□□□□ -0.13
VTI1A-206ENST00000489142 RHOAP61586 193 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 CCDC15Q0P6D6 951 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 DNAJC3Q13217 504 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 SMTNL2Q2TAL5 461 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 TMEM259Q4ZIN3 620 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 ERMARDQ5T6L9 678 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 GCNT7Q6ZNI0 430 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 UMODL1-AS1Q8N2C9 162 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 OR13H1Q8NG92 308 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 ADAMTS14Q8WXS8 1223 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 KLHDC7BQ96G42 594 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 GDAP1L1Q96MZ0 367 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 CALN1Q9BXU9 219 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 SLC39A8Q9C0K1 460 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 MSRB2Q9Y3D2 182 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 MFHAS1Q9Y4C4 1052 aa14.23□□□□□ -0.13
VTI1A-206ENST00000489142 SHROOM3Q8TF72 1996 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 A0A1W2PQJ5 194 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 IGLON5A6NGN9 336 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 NEMP1O14524 444 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 DAPK3O43293 454 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 TNFSF14O43557 240 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 DFNA5O60443 496 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 LRCH4O75427 683 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 PIGNO95427 931 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 POP4O95707 220 aaKnown RBP14.22□□□□□ -0.13
VTI1A-206ENST00000489142 PAK4O96013 591 aaPredicted RBP14.22□□□□□ -0.13
VTI1A-206ENST00000489142 GYPCP04921 128 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 HNRNPA2B1P22626 353 aaKnown RBP14.22□□□□□ -0.13
VTI1A-206ENST00000489142 AKT2P31751 481 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 NUDT1P36639 197 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 ARRB1P49407 418 aaPredicted RBP14.22□□□□□ -0.13
VTI1A-206ENST00000489142 CLDN6P56747 220 aa14.22□□□□□ -0.13
VTI1A-206ENST00000489142 YBEYP58557 167 aaPredicted RBP14.22□□□□□ -0.13
VTI1A-206ENST00000489142 CYTH1Q15438 398 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms