RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 HNRNPA2B1P22626 353 aaKnown RBP23.39■■□□□ 1.33
COL9A3-213ENST00000489045 AKT2P31751 481 aa23.39■■□□□ 1.33
COL9A3-213ENST00000489045 SNRPD1P62314 119 aaKnown RBP23.39■■□□□ 1.33
COL9A3-213ENST00000489045 PLEKHA7Q6IQ23 1121 aa23.39■■□□□ 1.33
COL9A3-213ENST00000489045 CCNI2Q6ZMN8 369 aaPredicted RBP23.39■■□□□ 1.33
COL9A3-213ENST00000489045 ZNF571Q7Z3V5 609 aaPredicted RBP23.39■■□□□ 1.33
COL9A3-213ENST00000489045 EID2Q8N6I1 236 aa23.39■■□□□ 1.33
COL9A3-213ENST00000489045 TTYH3Q9C0H2 523 aa23.39■■□□□ 1.33
COL9A3-213ENST00000489045 KLC2Q9H0B6 622 aa23.39■■□□□ 1.33
COL9A3-213ENST00000489045 CATSPERBQ9H7T0 1116 aa23.39■■□□□ 1.33
COL9A3-213ENST00000489045 FADS3Q9Y5Q0 445 aa23.39■■□□□ 1.33
COL9A3-213ENST00000489045 ZSCAN5CA6NGD5 496 aaPredicted RBP23.38■■□□□ 1.33
COL9A3-213ENST00000489045 WASH4PA8MWX3 477 aa23.38■■□□□ 1.33
COL9A3-213ENST00000489045 KRIT1O00522 736 aa23.38■■□□□ 1.33
COL9A3-213ENST00000489045 TMCC1O94876 653 aa23.38■■□□□ 1.33
COL9A3-213ENST00000489045 SERPINC1P01008 464 aa23.38■■□□□ 1.33
COL9A3-213ENST00000489045 THEGLP0DJG4 465 aa23.38■■□□□ 1.33
COL9A3-213ENST00000489045 PSMA2P25787 234 aa23.38■■□□□ 1.33
COL9A3-213ENST00000489045 PRKCIP41743 596 aa23.38■■□□□ 1.33
COL9A3-213ENST00000489045 KIAA1161Q6NSJ0 714 aa23.38■■□□□ 1.33
COL9A3-213ENST00000489045 TMPRSS7Q7RTY8 843 aa23.38■■□□□ 1.33
COL9A3-213ENST00000489045 HMCESQ96FZ2 354 aa23.38■■□□□ 1.33
COL9A3-213ENST00000489045 CNDP2Q96KP4 475 aaKnown RBP23.38■■□□□ 1.33
COL9A3-213ENST00000489045 GPATCH2LQ9NWQ4 482 aa23.38■■□□□ 1.33
COL9A3-213ENST00000489045 SYCE3A1L190 88 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 C16orf96A6NNT2 1141 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 RASA4BC9J798 803 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 ENC1O14682 589 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 FGF10O15520 208 aaPredicted RBP23.37■■□□□ 1.33
COL9A3-213ENST00000489045 RASA4O43374 803 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 AP1G1O43747 822 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 LDOC1O95751 146 aaPredicted RBP23.37■■□□□ 1.33
COL9A3-213ENST00000489045 ABL2P42684 1182 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 YBEYP58557 167 aaPredicted RBP23.37■■□□□ 1.33
COL9A3-213ENST00000489045 TPI1P60174 286 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 RPS21P63220 83 aaKnown RBP23.37■■□□□ 1.33
COL9A3-213ENST00000489045 KLHL30Q0D2K2 578 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 MAPK8IP2Q13387 824 aaPredicted RBP23.37■■□□□ 1.33
COL9A3-213ENST00000489045 NR1I3Q14994 352 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 ZNF805Q5CZA5 627 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 ATXN7L2Q5T6C5 722 aaPredicted RBP23.37■■□□□ 1.33
COL9A3-213ENST00000489045 GCNT7Q6ZNI0 430 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 KANSL1Q7Z3B3 1105 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 OR13H1Q8NG92 308 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 VOPP1Q96AW1 172 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 LRIG1Q96JA1 1093 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 AP4E1Q9UPM8 1137 aa23.37■■□□□ 1.33
COL9A3-213ENST00000489045 GOLGA4Q13439 2230 aaKnown RBP23.37■■□□□ 1.33
COL9A3-213ENST00000489045 DDX3XO00571 662 aaKnown RBP eCLIP23.36■■□□□ 1.334e-17■□□□□ 9.8
COL9A3-213ENST00000489045 SDC3O75056 442 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 POP4O95707 220 aaKnown RBP23.36■■□□□ 1.33
COL9A3-213ENST00000489045 UGT2B4P06133 528 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 GZMAP12544 262 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 CLDN2P57739 230 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 DNAJC3Q13217 504 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 SERINC3Q13530 473 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 MYLK3Q32MK0 819 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 PARP15Q460N3 678 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 UMODL1-AS1Q8N2C9 162 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 NETO2Q8NC67 525 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 CASKIN2Q8WXE0 1202 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 FEM1CQ96JP0 617 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 GDAP1L1Q96MZ0 367 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 CALN1Q9BXU9 219 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 SLC17A9Q9BYT1 436 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 EDEM3Q9BZQ6 932 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 ANKRD11Q6UB99 2663 aaPredicted RBP23.36■■□□□ 1.33
COL9A3-213ENST00000489045 PKD1L2Q7Z442 2459 aa23.36■■□□□ 1.33
COL9A3-213ENST00000489045 DMXL2Q8TDJ6 3036 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 FTLP02792 175 aaPredicted RBP23.35■■□□□ 1.33
COL9A3-213ENST00000489045 SKILP12757 684 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 HTR7P34969 479 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 RHOAP61586 193 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 FGL2Q14314 439 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 CA9Q16790 459 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 KLHL40Q2TBA0 621 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 DHRS13Q6UX07 377 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 ABI3BPQ7Z7G0 1075 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 MARCH9Q86YJ5 346 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 GALNT15Q8N3T1 639 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 ARFGAP1Q8N6T3 406 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 RAB7BQ96AH8 199 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 ZNF653Q96CK0 615 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 KLHL32Q96NJ5 620 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 PEBP4Q96S96 227 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 OSBPL1AQ9BXW6 950 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 TRIM7Q9C029 511 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 DHX35Q9H5Z1 703 aaKnown RBP23.35■■□□□ 1.33
COL9A3-213ENST00000489045 CBX8Q9HC52 389 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 CNOT8Q9UFF9 292 aaKnown RBP23.35■■□□□ 1.33
COL9A3-213ENST00000489045 GGT7Q9UJ14 662 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 ITM2BQ9Y287 266 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 CFAP47Q6ZTR5 3102 aa23.35■■□□□ 1.33
COL9A3-213ENST00000489045 ZFHX4Q86UP3 3567 aa23.34■■□□□ 1.33
COL9A3-213ENST00000489045 ANKRD36A6QL64 1941 aa23.34■■□□□ 1.33
COL9A3-213ENST00000489045 TMEM191CA6NGB0 347 aa23.34■■□□□ 1.33
COL9A3-213ENST00000489045 SRRM3A6NNA2 597 aaPredicted RBP23.34■■□□□ 1.33
COL9A3-213ENST00000489045 A6NNZ2 444 aa23.34■■□□□ 1.33
COL9A3-213ENST00000489045 IGSF6O95976 241 aa23.34■■□□□ 1.33
COL9A3-213ENST00000489045 CAPNS1P04632 268 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms