RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 PCDH8O95206 1070 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 KRT7P08729 469 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 ITGB7P26010 798 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 SERPINB6P35237 376 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 GJC1P36383 396 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 GRIA4P48058 902 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 CSNK1EP49674 416 aaKnown RBP14.51□□□□□ -0.09
BRCA1-218ENST00000489037 SLC25A11Q02978 314 aaKnown RBP14.51□□□□□ -0.09
BRCA1-218ENST00000489037 DPYSQ14117 519 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 MESDQ14696 234 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 GRM3Q14832 879 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 SETMARQ53H47 684 aaPredicted RBP14.51□□□□□ -0.09
BRCA1-218ENST00000489037 PPM1JQ5JR12 505 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 POLNQ7Z5Q5 900 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 TRIM69Q86WT6 500 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 KCTD6Q8NC69 237 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 OR6K2Q8NGY2 324 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 C1orf216Q8TAB5 229 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 SLC35G2Q8TBE7 412 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 SERAC1Q96JX3 654 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 KLC2Q9H0B6 622 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 SLC32A1Q9H598 525 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 PCDH18Q9HCL0 1135 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 RCOR3Q9P2K3 495 aaPredicted RBP14.51□□□□□ -0.09
BRCA1-218ENST00000489037 INTUQ9ULD6 942 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 DMTF1Q9Y222 760 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 DMXL1Q9Y485 3027 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 ANKRD36A6QL64 1941 aa14.51□□□□□ -0.09
BRCA1-218ENST00000489037 A0A1B0GVT2 93 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 TM4SF5O14894 197 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 PRAMEF11O60813 436 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 RNGTTO60942 597 aaKnown RBP14.5□□□□□ -0.09
BRCA1-218ENST00000489037 PALMO75781 387 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 TCF4P15884 667 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 AMPD1P23109 780 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 MAT2AP31153 395 aaKnown RBP14.5□□□□□ -0.09
BRCA1-218ENST00000489037 MAN1A1P33908 653 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 CYLC1P35663 651 aaPredicted RBP14.5□□□□□ -0.09
BRCA1-218ENST00000489037 ARHGAP25P42331 645 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 IL10RBQ08334 325 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 SLC14A1Q13336 389 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 RFTN1Q14699 578 aaPredicted RBP14.5□□□□□ -0.09
BRCA1-218ENST00000489037 PDK2Q15119 407 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 SPA17Q15506 151 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 ODF2Q5BJF6 829 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 ZNF805Q5CZA5 627 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 ATXN7L2Q5T6C5 722 aaPredicted RBP14.5□□□□□ -0.09
BRCA1-218ENST00000489037 PIP5KL1Q5T9C9 394 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 CCDC170Q8IYT3 715 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 BBS5Q8N3I7 341 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 TC2NQ8N9U0 490 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 NSMCE1Q8WV22 266 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 RAB7BQ96AH8 199 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 CSPG4P5Q96PW8 444 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 CINPQ9BW66 212 aaPredicted RBP14.5□□□□□ -0.09
BRCA1-218ENST00000489037 GAREM1Q9H706 876 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 DNAAF2Q9NVR5 837 aaKnown RBP14.5□□□□□ -0.09
BRCA1-218ENST00000489037 IPO11Q9UI26 975 aaKnown RBP14.5□□□□□ -0.09
BRCA1-218ENST00000489037 ANKRD6Q9Y2G4 727 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 TMEM131Q92545 1883 aa14.5□□□□□ -0.09
BRCA1-218ENST00000489037 A0A1W2PQU0 124 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 J3KR12 359 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 NEMP1O14524 444 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 VILLO15195 856 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 LATO43561 262 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 DFNA5O60443 496 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 MAGEC1O60732 1142 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 IPO7O95373 1038 aaKnown RBP14.49□□□□□ -0.09
BRCA1-218ENST00000489037 UGT2B4P06133 528 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 ADRB3P13945 408 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 XPAP23025 273 aaPredicted RBP14.49□□□□□ -0.09
BRCA1-218ENST00000489037 CD38P28907 300 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 MAGEA1P43355 309 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 RENBPP51606 427 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 PPP2CBP62714 309 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 PPP2CAP67775 309 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 STAT4Q14765 748 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 CYTH1Q15438 398 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 CFAP58Q5T655 872 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 TMCO4Q5TGY1 634 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 AFMIDQ63HM1 303 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 TXNRD3NBQ6F5E7 133 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 NAPEPLDQ6IQ20 393 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 GDPD4Q6W3E5 623 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 ZSCAN30Q86W11 494 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 PAF1Q8N7H5 531 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 RFFLQ8WZ73 363 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 FEM1CQ96JP0 617 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 SLC6A18Q96N87 628 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 KLHL32Q96NJ5 620 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 PANX2Q96RD6 677 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 CALN1Q9BXU9 219 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 MFHAS1Q9Y4C4 1052 aa14.49□□□□□ -0.09
BRCA1-218ENST00000489037 C16orf96A6NNT2 1141 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 PRAMEF26H0Y7S4 382 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 KCNK5O95279 499 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 CSRP1P21291 193 aaKnown RBP14.48□□□□□ -0.09
BRCA1-218ENST00000489037 GKP32189 559 aa14.48□□□□□ -0.09
BRCA1-218ENST00000489037 NOP2P46087 812 aaKnown RBP14.48□□□□□ -0.09
BRCA1-218ENST00000489037 NOVA1P51513 510 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms