RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 NUDT6P53370 316 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 ARSFP54793 590 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 BNC1Q01954 994 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 KEAP1Q14145 624 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 CTTNQ14247 550 aaKnown RBP3.88□□□□□ -1.79
RFC4-213ENST00000489028 ANKRD45Q5TZF3 282 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 MON1BQ7L1V2 547 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 TMC8Q8IU68 726 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 CLIP4Q8N3C7 705 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 GFM1Q96RP9 751 aaKnown RBP3.88□□□□□ -1.79
RFC4-213ENST00000489028 ISCA1Q9BUE6 129 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 PHF7Q9BWX1 381 aaPredicted RBP3.88□□□□□ -1.79
RFC4-213ENST00000489028 SEZ6LQ9BYH1 1024 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 MROH8Q9H579 483 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 CLK4Q9HAZ1 481 aaKnown RBP3.88□□□□□ -1.79
RFC4-213ENST00000489028 CD93Q9NPY3 652 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 SELENONQ9NZV5 590 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 WNT16Q9UBV4 365 aa3.88□□□□□ -1.79
RFC4-213ENST00000489028 SRPRBQ9Y5M8 271 aaKnown RBP3.88□□□□□ -1.79
RFC4-213ENST00000489028 EYA2O00167 538 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 PAPSS2O95340 614 aaPredicted RBP3.87□□□□□ -1.79
RFC4-213ENST00000489028 PPP1R3DO95685 299 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 GLUD1P00367 558 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 NAGAP17050 411 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 AMTP48728 403 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 GLUD2P49448 558 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 PAPOLAP51003 745 aaKnown RBP3.87□□□□□ -1.79
RFC4-213ENST00000489028 GOLGA8FQ08AF8 430 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 EFR3AQ14156 821 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 TDRD12Q587J7 1177 aaKnown RBP3.87□□□□□ -1.79
RFC4-213ENST00000489028 PRAMEF19Q5SWL8 479 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 C8orf82Q6P1X6 216 aaPredicted RBP3.87□□□□□ -1.79
RFC4-213ENST00000489028 PDXDC1Q6P996 788 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 MON1AQ86VX9 555 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 CPOQ8IVL8 374 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 GHDCQ8N2G8 530 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 MCPH1Q8NEM0 835 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 HSPH1Q92598 858 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 STAMQ92783 540 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 MEIS3Q99687 375 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 REEP2Q9BRK0 252 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 ADGRF5Q8IZF2 1346 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 NOTCH4Q99466 2003 aa3.87□□□□□ -1.79
RFC4-213ENST00000489028 A0A096LPK6 155 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 IGHV4-28A0A0C4DH34 117 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 SH2D7A6NKC9 451 aaPredicted RBP3.86□□□□□ -1.79
RFC4-213ENST00000489028 KDM4EB2RXH2 506 aaPredicted RBP3.86□□□□□ -1.79
RFC4-213ENST00000489028 PER2O15055 1255 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 ANP32CO43423 234 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 WEE2P0C1S8 567 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 TTKP33981 857 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 GPR12P47775 334 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 CENPAP49450 140 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 CXCR3P49682 368 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 CCR5P51681 352 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 FAM27E3Q08E93 113 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 SLC12A1Q13621 1099 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 CAPSQ13938 189 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 LPIN1Q14693 890 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 ANKRD1Q15327 319 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 ASIC2Q16515 512 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 NADSYN1Q6IA69 706 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 PALB2Q86YC2 1186 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 LSM14AQ8ND56 463 aaKnown RBP3.86□□□□□ -1.79
RFC4-213ENST00000489028 OR14A16Q8NHC5 309 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 LMO3Q8TAP4 145 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 TBC1D22AQ8WUA7 517 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 RAB40AQ8WXH6 277 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 PYM1Q9BRP8 204 aaKnown RBP3.86□□□□□ -1.79
RFC4-213ENST00000489028 HERPUD2Q9BSE4 406 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 SLC32A1Q9H598 525 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 NOD2Q9HC29 1040 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 IL36RNQ9UBH0 155 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 CNPY2Q9Y2B0 182 aa3.86□□□□□ -1.79
RFC4-213ENST00000489028 LINC01553A4QN01 128 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 CBY3A6NI87 242 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 SRRM3A6NNA2 597 aaPredicted RBP3.85□□□□□ -1.79
RFC4-213ENST00000489028 J3KR12 359 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 CHL1O00533 1208 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 TIMM23O14925 209 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 ASAP2O43150 1006 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 ITM2AO43736 263 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 CHRM4P08173 479 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 CBSLP0DN79 551 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 FGF3P11487 239 aaPredicted RBP3.85□□□□□ -1.79
RFC4-213ENST00000489028 CBSP35520 551 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 MXI1P50539 228 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 KIF5AQ12840 1032 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 GRSF1Q12849 480 aaKnown RBP eCLIP3.85□□□□□ -1.79
RFC4-213ENST00000489028 NFATC4Q14934 902 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 MAP3K21Q5TCX8 1036 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 C17orf99Q6UX52 265 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.85□□□□□ -1.79
RFC4-213ENST00000489028 BBS12Q6ZW61 710 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 MOB3CQ70IA8 216 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 ARMC9Q7Z3E5 817 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 FJX1Q86VR8 437 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 CHD1LQ86WJ1 897 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 DCP1BQ8IZD4 617 aaKnown RBP3.85□□□□□ -1.79
RFC4-213ENST00000489028 ANKRD42Q8N9B4 389 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms