RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 TRHDEQ9UKU6 1024 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 ATP8A1Q9Y2Q0 1164 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 TECTAO75443 2155 aa12.5□□□□□ -0.41
TRAIP-209ENST00000488860 C5orf60A6NFR6 353 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 TMEM221A6NGB7 291 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 M0R296 226 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 INSIG1O15503 277 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 RAD51CO43502 376 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 SYNCRIPO60506 623 aaKnown RBP12.49□□□□□ -0.41
TRAIP-209ENST00000488860 SIN3BO75182 1162 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 DCNP07585 359 aaKnown RBP12.49□□□□□ -0.41
TRAIP-209ENST00000488860 CHRM1P11229 460 aaPredicted RBP12.49□□□□□ -0.41
TRAIP-209ENST00000488860 ALADP13716 330 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 VASPP50552 380 aaPredicted RBP12.49□□□□□ -0.41
TRAIP-209ENST00000488860 DHX34Q14147 1143 aaKnown RBP12.49□□□□□ -0.41
TRAIP-209ENST00000488860 STARD3Q14849 445 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 HNRNPA1L2Q32P51 320 aaKnown RBP12.49□□□□□ -0.41
TRAIP-209ENST00000488860 CARD16Q5EG05 197 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 EOGTQ5NDL2 527 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 CWF19L1Q69YN2 538 aaKnown RBP12.49□□□□□ -0.41
TRAIP-209ENST00000488860 TRIM67Q6ZTA4 783 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 JAMLQ86YT9 394 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 ZNF687Q8N1G0 1237 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 STK40Q8N2I9 435 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 PAF1Q8N7H5 531 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 CNTD1Q8N815 330 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 KDM1BQ8NB78 822 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 CHST14Q8NCH0 376 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 LRRN4CLQ8ND94 238 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 GRIN3AQ8TCU5 1115 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 KCNV2Q8TDN2 545 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 OR8D1Q8WZ84 308 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 PTPRN2Q92932 1015 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 ISG20Q96AZ6 181 aaKnown RBP12.49□□□□□ -0.41
TRAIP-209ENST00000488860 TEKT5Q96M29 485 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 NELL2Q99435 816 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 POLR3BQ9NW08 1133 aaPredicted RBP12.49□□□□□ -0.41
TRAIP-209ENST00000488860 PAK5Q9P286 719 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 HECAQ9UBI9 543 aaPredicted RBP12.49□□□□□ -0.41
TRAIP-209ENST00000488860 SUN2Q9UH99 717 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 PCYOX1Q9UHG3 505 aa12.49□□□□□ -0.41
TRAIP-209ENST00000488860 FEZ2Q9UHY8 353 aaPredicted RBP12.49□□□□□ -0.41
TRAIP-209ENST00000488860 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
TRAIP-209ENST00000488860 ADAM23O75077 832 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 ZNF821O75541 412 aaPredicted RBP12.48□□□□□ -0.41
TRAIP-209ENST00000488860 GCATO75600 419 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 PIGNO95427 931 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 COL9A1P20849 921 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 GKP32189 559 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 CD68P34810 354 aaPredicted RBP12.48□□□□□ -0.41
TRAIP-209ENST00000488860 RPL22P35268 128 aaKnown RBP12.48□□□□□ -0.41
TRAIP-209ENST00000488860 CD86P42081 329 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 PTGIRP43119 386 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 LMAN1P49257 510 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 BASP1P80723 227 aaKnown RBP12.48□□□□□ -0.41
TRAIP-209ENST00000488860 NIPAL4Q0D2K0 466 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 GPS1Q13098 491 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 PTK6Q13882 451 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 PRPSAP1Q14558 356 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 PCSK7Q16549 785 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 TEX35Q5T0J7 233 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 SYCP2LQ5T4T6 812 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 DPY19L3Q6ZPD9 716 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 SRLQ86TD4 932 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 SYNPOQ8N3V7 929 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 NOA1Q8NC60 698 aaKnown RBP12.48□□□□□ -0.41
TRAIP-209ENST00000488860 OR2A12Q8NGT7 310 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 SPATA22Q8NHS9 363 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 NUDCD1Q96RS6 583 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 RBM15Q96T37 977 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAIP-209ENST00000488860 GABRG3Q99928 467 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 TRIM31Q9BZY9 425 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 NOD2Q9HC29 1040 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 PRSS16Q9NQE7 514 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 UBP1Q9NZI7 540 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 IL36AQ9UHA7 158 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 MMP17Q9ULZ9 603 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 SIT1Q9Y3P8 196 aa12.48□□□□□ -0.41
TRAIP-209ENST00000488860 TARSL2A2RTX5 802 aaKnown RBP12.47□□□□□ -0.41
TRAIP-209ENST00000488860 FAM187AA6NFU0 413 aa12.47□□□□□ -0.41
TRAIP-209ENST00000488860 E7EVH7 732 aa12.47□□□□□ -0.41
TRAIP-209ENST00000488860 METTL18O95568 372 aa12.47□□□□□ -0.41
TRAIP-209ENST00000488860 MT-CYBP00156 380 aaPredicted RBP12.47□□□□□ -0.41
TRAIP-209ENST00000488860 SERPINF2P08697 491 aa12.47□□□□□ -0.41
TRAIP-209ENST00000488860 PSMD8P48556 350 aa12.47□□□□□ -0.41
TRAIP-209ENST00000488860 AP1S1P61966 158 aa12.47□□□□□ -0.41
TRAIP-209ENST00000488860 RAD51Q06609 339 aa12.47□□□□□ -0.41
TRAIP-209ENST00000488860 ENPP2Q13822 863 aa12.47□□□□□ -0.41
TRAIP-209ENST00000488860 MYLK3Q32MK0 819 aa12.47□□□□□ -0.41
TRAIP-209ENST00000488860 POM121L1PQ3SYA9 428 aa12.47□□□□□ -0.41
TRAIP-209ENST00000488860 HSF5Q4G112 596 aaPredicted RBP12.47□□□□□ -0.41
TRAIP-209ENST00000488860 CFAP58Q5T655 872 aa12.47□□□□□ -0.41
TRAIP-209ENST00000488860 C9orf64Q5T6V5 341 aa12.47□□□□□ -0.41
TRAIP-209ENST00000488860 KIAA1211LQ6NV74 962 aa12.47□□□□□ -0.41
TRAIP-209ENST00000488860 NCEH1Q6PIU2 408 aa12.47□□□□□ -0.41
TRAIP-209ENST00000488860 SYDE1Q6ZW31 735 aaPredicted RBP12.47□□□□□ -0.41
TRAIP-209ENST00000488860 MAATS1Q7Z4T9 603 aa12.47□□□□□ -0.41
TRAIP-209ENST00000488860 MMGT1Q8N4V1 131 aa12.47□□□□□ -0.41
TRAIP-209ENST00000488860 PDCD6IPQ8WUM4 868 aaKnown RBP12.47□□□□□ -0.41
TRAIP-209ENST00000488860 SLCO2A1Q92959 643 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms