RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 SLC7A2P52569 658 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 MRPS15P82914 257 aaKnown RBP16.38■□□□□ 0.21
MCF2L-229ENST00000488765 UGCGQ16739 394 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 ZNF347Q96SE7 839 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 WDR11Q9BZH6 1224 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 GLT8D2Q9H1C3 349 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 TCAF1Q9Y4C2 921 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 NHSQ6T4R5 1651 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 NFIBO00712 420 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 NRP2O60462 931 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 BCAS1O75363 584 aaPredicted RBP16.37■□□□□ 0.21
MCF2L-229ENST00000488765 ASNSP08243 561 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 ITGB6P18564 788 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 ACO1P21399 889 aaKnown RBP16.37■□□□□ 0.21
MCF2L-229ENST00000488765 NPTX2P47972 431 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 NLRP11P59045 1033 aaKnown RBP16.37■□□□□ 0.21
MCF2L-229ENST00000488765 PCSK7Q16549 785 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 MAMDC4Q6UXC1 1216 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 TMEM35BQ8NCS4 154 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 OR5B17Q8NGF7 314 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 SCYL1Q96KG9 808 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 SIGLEC10Q96LC7 697 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 MUS81Q96NY9 551 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 SEPHS2Q99611 448 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 HOXD1Q9GZZ0 328 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 TCEAL9Q9UHQ7 104 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 COQ4Q9Y3A0 265 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 SLC30A1Q9Y6M5 507 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 NAV1Q8NEY1 1877 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 ILVBLA1L0T0 632 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 HNRNPLP14866 589 aaKnown RBP eCLIP16.37■□□□□ 0.21
MCF2L-229ENST00000488765 OXTRP30559 389 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 IFNA8P32881 189 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 PLA2G16P53816 162 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 DGCR6Q14129 220 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 ACAP2Q15057 778 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 STYK1Q6J9G0 422 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 PHF13Q86YI8 300 aaPredicted RBP16.37■□□□□ 0.21
MCF2L-229ENST00000488765 CCDC103Q8IW40 242 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 FNIP1Q8TF40 1166 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 BSNDQ8WZ55 320 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 TFAP2BQ92481 460 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 ASB9Q96DX5 294 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 AGAP2Q99490 1192 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 ARFGEF1Q9Y6D6 1849 aa16.37■□□□□ 0.21
MCF2L-229ENST00000488765 APOC4-APOC2K7ER74 178 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 PARNO95453 639 aaKnown RBP16.36■□□□□ 0.21
MCF2L-229ENST00000488765 APOC2P02655 101 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 TSPAN8P19075 237 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 ATP6V1B2P21281 511 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 ATICP31939 592 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 AP3M2P53677 418 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 SLC25A11Q02978 314 aaKnown RBP16.36■□□□□ 0.21
MCF2L-229ENST00000488765 ABRAXAS1Q6UWZ7 409 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 TRPC4APQ8TEL6 797 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 EBNA1BP2Q99848 306 aaKnown RBP16.36■□□□□ 0.21
MCF2L-229ENST00000488765 PLSCR3Q9NRY6 295 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 SEPT3Q9UH03 358 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 PCDHB12Q9Y5F1 795 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 ASNA1O43681 348 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 NADKO95544 446 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-229ENST00000488765 CST3P01034 146 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-229ENST00000488765 MTHFD1P11586 935 aaKnown RBP16.36■□□□□ 0.21
MCF2L-229ENST00000488765 MYL4P12829 197 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 SPNP16150 400 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 TGM1P22735 817 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 FMO4P31512 558 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 GRIA4P48058 902 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
MCF2L-229ENST00000488765 CAPRIN1Q14444 709 aaKnown RBP16.36■□□□□ 0.21
MCF2L-229ENST00000488765 HADHQ16836 314 aaKnown RBP16.36■□□□□ 0.21
MCF2L-229ENST00000488765 LRIT3Q3SXY7 679 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 CYP4V2Q6ZWL3 525 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-229ENST00000488765 WDTC1Q8N5D0 677 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 POC5Q8NA72 575 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 ADAMTS16Q8TE57 1224 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 FUNDC2Q9BWH2 189 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 SLC7A5P2Q9GIP4 190 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 SNX15Q9NRS6 342 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 HEATR9A2RTY3 570 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 WNT10BO00744 389 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 TBX1O43435 398 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 IDH3BO43837 385 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 VNN1O95497 513 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 C8BP07358 591 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 NCK1P16333 377 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 CES1P23141 567 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 MGAT1P26572 445 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 NOVP48745 357 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 HARS2P49590 506 aaKnown RBP16.36■□□□□ 0.21
MCF2L-229ENST00000488765 PIGHQ14442 188 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-229ENST00000488765 DHFR2Q86XF0 187 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 OSCP1Q8WVF1 389 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 GLMNQ92990 594 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 EFHD2Q96C19 240 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-229ENST00000488765 TCF12Q99081 682 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 IRF2BPLQ9H1B7 796 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 HMG20AQ9NP66 347 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 ADPRHL2Q9NX46 363 aa16.36■□□□□ 0.21
MCF2L-229ENST00000488765 DPP3Q9NY33 737 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms