RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 SLC5A3P53794 718 aa14.4□□□□□ -0.1
ABCB1-207ENST00000488737 EPHB1P54762 984 aa14.4□□□□□ -0.1
ABCB1-207ENST00000488737 ITGA7Q13683 1181 aa14.4□□□□□ -0.1
ABCB1-207ENST00000488737 ARL13AQ5H913 290 aaPredicted RBP14.4□□□□□ -0.1
ABCB1-207ENST00000488737 C16orf89Q6UX73 402 aa14.4□□□□□ -0.1
ABCB1-207ENST00000488737 CXCL17Q6UXB2 119 aa14.4□□□□□ -0.1
ABCB1-207ENST00000488737 KIAA0408Q6ZU52 694 aa14.4□□□□□ -0.1
ABCB1-207ENST00000488737 TMC7Q7Z402 723 aa14.4□□□□□ -0.1
ABCB1-207ENST00000488737 SPATA2LQ8IUW3 424 aaPredicted RBP14.4□□□□□ -0.1
ABCB1-207ENST00000488737 TRPV1Q8NER1 839 aa14.4□□□□□ -0.1
ABCB1-207ENST00000488737 RP9Q8TA86 221 aaKnown RBP14.4□□□□□ -0.1
ABCB1-207ENST00000488737 SCAMP5Q8TAC9 235 aa14.4□□□□□ -0.1
ABCB1-207ENST00000488737 UCMAQ8WVF2 138 aa14.4□□□□□ -0.1
ABCB1-207ENST00000488737 FCRL2Q96LA5 508 aaPredicted RBP14.4□□□□□ -0.1
ABCB1-207ENST00000488737 GPR78Q96P69 363 aa14.4□□□□□ -0.1
ABCB1-207ENST00000488737 LENG8Q96PV6 779 aaPredicted RBP14.4□□□□□ -0.1
ABCB1-207ENST00000488737 ZNF385DQ9H6B1 395 aa14.4□□□□□ -0.1
ABCB1-207ENST00000488737 MAN1C1Q9NR34 630 aa14.4□□□□□ -0.1
ABCB1-207ENST00000488737 DOCK4Q8N1I0 1966 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 LOC100653049A0A140TA62 436 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 KCNU1A8MYU2 1149 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 TNPO2O14787 897 aaKnown RBP14.39□□□□□ -0.11
ABCB1-207ENST00000488737 GRID2O43424 1007 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 MGEA5O60502 916 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 KRT34O76011 436 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 PGK1P00558 417 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 TFEBP19484 476 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 CD151P48509 253 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 DNAJB13P59910 316 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 POU4F1Q01851 419 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 CDC16Q13042 620 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 LSM12Q3MHD2 195 aaKnown RBP14.39□□□□□ -0.11
ABCB1-207ENST00000488737 MAP3K21Q5TCX8 1036 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 ESRP1Q6NXG1 681 aaKnown RBP14.39□□□□□ -0.11
ABCB1-207ENST00000488737 RANBP10Q6VN20 620 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 GABPB2Q8TAK5 448 aaPredicted RBP14.39□□□□□ -0.11
ABCB1-207ENST00000488737 CASP10Q92851 521 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 PPP2R3CQ969Q6 453 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 ZNF419Q96HQ0 510 aaPredicted RBP14.39□□□□□ -0.11
ABCB1-207ENST00000488737 MRGPRX2Q96LB1 330 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 C1orf74Q96LT6 269 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 SERPINB11Q96P15 392 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 SERPINI1Q99574 410 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 MRPL57Q9BQC6 102 aaKnown RBP14.39□□□□□ -0.11
ABCB1-207ENST00000488737 FSD1LQ9BXM9 530 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 MRPL46Q9H2W6 279 aaKnown RBP14.39□□□□□ -0.11
ABCB1-207ENST00000488737 CYP4F11Q9HBI6 524 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 SPC25Q9HBM1 224 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 ARNT2Q9HBZ2 717 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 RBM22Q9NW64 420 aaKnown RBP eCLIP14.39□□□□□ -0.11
ABCB1-207ENST00000488737 VPS28Q9UK41 221 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 ABT1Q9ULW3 272 aaKnown RBP14.39□□□□□ -0.11
ABCB1-207ENST00000488737 CDYLQ9Y232 598 aa14.39□□□□□ -0.11
ABCB1-207ENST00000488737 E9PAM4 449 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 INPPL1O15357 1258 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 DLX3O60479 287 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 PDE5AO76074 875 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 CYBAP13498 195 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 SAT1P21673 171 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 CD52P31358 61 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 PPARGP37231 505 aaPredicted RBP14.38□□□□□ -0.11
ABCB1-207ENST00000488737 SLC1A2P43004 574 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 ZNF157P51786 506 aaPredicted RBP14.38□□□□□ -0.11
ABCB1-207ENST00000488737 NAGLUP54802 743 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 RPL26P61254 145 aaKnown RBP14.38□□□□□ -0.11
ABCB1-207ENST00000488737 MPP1Q00013 466 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 NSUN2Q08J23 767 aaKnown RBP eCLIP14.38□□□□□ -0.11
ABCB1-207ENST00000488737 PAN2Q504Q3 1202 aaKnown RBP14.38□□□□□ -0.11
ABCB1-207ENST00000488737 SCD5Q86SK9 330 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 DENND6AQ8IWF6 608 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 SLC26A7Q8TE54 656 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 RANBP9Q96S59 729 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 TMEM209Q96SK2 561 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 SHCBP1LQ9BZQ2 653 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 SLC25A51Q9H1U9 297 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 OSER1Q9NX31 292 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 DLGAP2Q9P1A6 1054 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 XPR1Q9UBH6 696 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 PCDHB8Q9UN66 801 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 GOLGA8QA0A0J9YX86 632 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 CCDC78A2IDD5 438 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 GOLGA8OA6NCC3 632 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 EIF4E1BA6NMX2 242 aaKnown RBP14.38□□□□□ -0.11
ABCB1-207ENST00000488737 GOLGA8NF8WBI6 632 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 SKAP2O75563 359 aaPredicted RBP14.38□□□□□ -0.11
ABCB1-207ENST00000488737 NEBLO76041 1014 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 AVPR1AP37288 418 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 TUBP50607 506 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 CTBP1Q13363 440 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 OR52E8Q6IFG1 317 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 PIWIL4Q7Z3Z4 852 aaKnown RBP14.38□□□□□ -0.11
ABCB1-207ENST00000488737 GALNT7Q86SF2 657 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 SAPCD2Q86UD0 394 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 RASAL3Q86YV0 1011 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 CEP97Q8IW35 865 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 LSMEM2Q8N112 164 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 SHKBP1Q8TBC3 707 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 CALML6Q8TD86 181 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 PYDC1Q8WXC3 89 aa14.38□□□□□ -0.11
ABCB1-207ENST00000488737 ELMO2Q96JJ3 720 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms