RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 GPSM1Q86YR5 675 aa3.47□□□□□ -1.85
CD46-215ENST00000488596 CPXM2Q8N436 756 aa3.47□□□□□ -1.85
CD46-215ENST00000488596 LRRC57Q8N9N7 239 aa3.47□□□□□ -1.85
CD46-215ENST00000488596 TNIP2Q8NFZ5 429 aa3.47□□□□□ -1.85
CD46-215ENST00000488596 ZCCHC10Q8TBK6 192 aa3.47□□□□□ -1.85
CD46-215ENST00000488596 ATOH1Q92858 354 aaPredicted RBP3.47□□□□□ -1.85
CD46-215ENST00000488596 MSI2Q96DH6 328 aaKnown RBP3.47□□□□□ -1.85
CD46-215ENST00000488596 ZFYVE19Q96K21 471 aa3.47□□□□□ -1.85
CD46-215ENST00000488596 CTAGE1Q96RT6 745 aa3.47□□□□□ -1.85
CD46-215ENST00000488596 UBA5Q9GZZ9 404 aa3.47□□□□□ -1.85
CD46-215ENST00000488596 SLC25A18Q9H1K4 315 aa3.47□□□□□ -1.85
CD46-215ENST00000488596 ACTR5Q9H9F9 607 aaPredicted RBP3.47□□□□□ -1.85
CD46-215ENST00000488596 ATP8A2Q9NTI2 1148 aa3.47□□□□□ -1.85
CD46-215ENST00000488596 ZDHHC7Q9NXF8 308 aa3.47□□□□□ -1.85
CD46-215ENST00000488596 IL1RAPL1Q9NZN1 696 aa3.47□□□□□ -1.85
CD46-215ENST00000488596 MSRB1Q9NZV6 116 aa3.47□□□□□ -1.85
CD46-215ENST00000488596 SLC25A10Q9UBX3 287 aaPredicted RBP3.47□□□□□ -1.85
CD46-215ENST00000488596 AGO2Q9UKV8 859 aaKnown RBP3.47□□□□□ -1.85
CD46-215ENST00000488596 OSGIN2Q9Y236 505 aa3.47□□□□□ -1.85
CD46-215ENST00000488596 TMEM98Q9Y2Y6 226 aa3.47□□□□□ -1.85
CD46-215ENST00000488596 NOTCH4Q99466 2003 aa3.47□□□□□ -1.85
CD46-215ENST00000488596 TTBK1Q5TCY1 1321 aaPredicted RBP3.46□□□□□ -1.85
CD46-215ENST00000488596 A0A0G2JK05 382 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 B4E171 279 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 FAM157AC9JC47 383 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 TMCC1O94876 653 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 F9P00740 461 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 SERPINC1P01008 464 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 LCKP06239 509 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 KRT10P13645 584 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 TNFRSF1BP20333 461 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 DDIT3P35638 169 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 TSPAN7P41732 249 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 DPP6P42658 865 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 CDKN2AP42771 156 aaKnown RBP3.46□□□□□ -1.86
CD46-215ENST00000488596 GPD2P43304 727 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 ARSFP54793 590 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 EFNB1P98172 346 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 MTX1Q13505 466 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 PKP1Q13835 747 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 RPE65Q16518 533 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 PRICKLE4Q2TBC4 344 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 SLC9B1Q4ZJI4 515 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 FAM180BQ6P0A1 224 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 C17orf99Q6UX52 265 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 IL20RBQ6UXL0 311 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 RSRC2Q7L4I2 434 aaKnown RBP3.46□□□□□ -1.86
CD46-215ENST00000488596 PRSS45Q7RTY3 260 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 ARMC8Q8IUR7 673 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 SLC25A41Q8N5S1 370 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 SLC44A5Q8NCS7 719 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 PPHLN1Q8NEY8 458 aaKnown RBP3.46□□□□□ -1.86
CD46-215ENST00000488596 RASSF8Q8NHQ8 419 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 TMEM174Q8WUU8 243 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 UCMAQ8WVF2 138 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 RFFLQ8WZ73 363 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 SKA1Q96BD8 255 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 CLMNQ96JQ2 1002 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 TEFMQ96QE5 360 aaKnown RBP3.46□□□□□ -1.86
CD46-215ENST00000488596 FRG2BQ96QU4 278 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 TRMOQ9BU70 441 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 VEZTQ9HBM0 779 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 ZBTB40Q9NUA8 1239 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 BEX4Q9NWD9 120 aaPredicted RBP3.46□□□□□ -1.86
CD46-215ENST00000488596 BABAM1Q9NWV8 329 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 GRHL1Q9NZI5 618 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 CTNNAL1Q9UBT7 734 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 AASSQ9UDR5 926 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 RAP2CQ9Y3L5 183 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 CLDN16Q9Y5I7 305 aa3.46□□□□□ -1.86
CD46-215ENST00000488596 ADGRF5Q8IZF2 1346 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 TEX13CA0A0J9YWL9 993 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 GOLGA6L10A0A0M3HER8 536 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 C17orf113A0A1B0GUU1 675 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 A0A1W2PPH5 198 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 IFNL4K9M1U5 179 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 ATG13O75143 517 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 TACC1O75410 805 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 RTN3O95197 1032 aaPredicted RBP3.45□□□□□ -1.86
CD46-215ENST00000488596 FGF2P09038 288 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 COX7A2P14406 83 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 EDN2P20800 178 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 TNFSF8P32971 234 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 HARS2P49590 506 aaKnown RBP3.45□□□□□ -1.86
CD46-215ENST00000488596 SIM2Q14190 667 aaPredicted RBP3.45□□□□□ -1.86
CD46-215ENST00000488596 RALBP1Q15311 655 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 TSTQ16762 297 aaKnown RBP3.45□□□□□ -1.86
CD46-215ENST00000488596 EDRF1Q3B7T1 1238 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 ASPHD1Q5U4P2 390 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 NAA35Q5VZE5 725 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 TBC1D9BQ66K14 1250 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 NUGGCQ68CJ6 796 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 FAAH2Q6GMR7 532 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 Q6ZTC4 211 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 KDELC2Q7Z4H8 507 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 FAM217AQ8IXS0 508 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 CNTROBQ8N137 903 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 DPP10Q8N608 796 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 GDPD5Q8WTR4 605 aa3.45□□□□□ -1.86
CD46-215ENST00000488596 HDAC7Q8WUI4 952 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms