RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, human

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCYT1A-215	ENST00000488235	RECQL	P46063	649 aa	Predicted RBP	11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	NSF	P46459	744 aa	Known RBP	11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	NEK3	P51956	506 aa		11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	MYL5	Q02045	173 aa		11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	UBXN1	Q04323	297 aa		11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	SLC20A2	Q08357	652 aa		11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	HES3	Q5TGS1	186 aa		11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	TRIM72	Q6ZMU5	477 aa		11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	TMPRSS12	Q86WS5	348 aa		11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	OXR1	Q8N573	874 aa		11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	C3orf20	Q8ND61	904 aa		11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	ERGIC2	Q96RQ1	377 aa		11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	KLF6	Q99612	283 aa	Predicted RBP	11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	SYT11	Q9BT88	431 aa		11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	DYRK4	Q9NR20	520 aa		11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	GPR27	Q9NS67	375 aa		11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	KLHL11	Q9NVR0	708 aa		11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	DKK4	Q9UBT3	224 aa		11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	KLF15	Q9UIH9	416 aa		11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	PNMA8B	Q9ULN7	279 aa	Predicted RBP	11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	GCN1	Q92616	2671 aa	Known RBP	11.42	□□□□□ -0.58
PCYT1A-215	ENST00000488235	LY6G6E	A0A0G2JKS1	128 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	IGLON5	A6NGN9	336 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	SIGLEC16	A6NMB1	481 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	C16orf96	A6NNT2	1141 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	FFAR2	O15552	330 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	RAMP2	O60895	175 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	JUP	P14923	745 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	CKMT2	P17540	419 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	AKT2	P31751	481 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	MAPKAPK2	P49137	400 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	INSM1	Q01101	510 aa	Predicted RBP	11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	FZD2	Q14332	565 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	STX1A	Q16623	288 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	ARL13B	Q3SXY8	428 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	E4F1	Q66K89	784 aa	Predicted RBP	11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235		Q6ZSR6	202 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	IRF2BP2	Q7Z5L9	587 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	RYBP	Q8N488	228 aa	Predicted RBP	11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	AOPEP	Q8N6M6	819 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	PDCD7	Q8N8D1	485 aa	Known RBP	11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	NEK11	Q8NG66	645 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	NTAN1	Q96AB6	310 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	ISG20	Q96AZ6	181 aa	Known RBP	11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	TBC1D31	Q96DN5	1066 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	HMCES	Q96FZ2	354 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	MCEE	Q96PE7	176 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	AGPAT1	Q99943	283 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	SELENOO	Q9BVL4	669 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	SLC17A9	Q9BYT1	436 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	SEPT11	Q9NVA2	429 aa	Known RBP	11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	ANO10	Q9NW15	660 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235		U3KQA8	63 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	TRPM6	Q9BX84	2022 aa		11.41	□□□□□ -0.58
PCYT1A-215	ENST00000488235	KRIT1	O00522	736 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	CASC3	O15234	703 aa	Known RBP	11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	INSIG1	O15503	277 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	ATMIN	O43313	823 aa	Predicted RBP	11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	TLX3	O43711	291 aa	Predicted RBP	11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	KDELR3	O43731	214 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	AP1G1	O43747	822 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	MAGEC1	O60732	1142 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	PIAS2	O75928	621 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	TMCC1	O94876	653 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	UGT2B4	P06133	528 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	ACP1	P24666	158 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	ANP32A	P39687	249 aa	Known RBP	11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	ZNF143	P52747	638 aa	Predicted RBP	11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	RPS21	P63220	83 aa	Known RBP	11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	ZNF211	Q13398	564 aa	Predicted RBP	11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	POLD3	Q15054	466 aa	Predicted RBP	11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	CA9	Q16790	459 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	MYLK3	Q32MK0	819 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	DNAJC24	Q6P3W2	148 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	SCYL2	Q6P3W7	929 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	SASS6	Q6UVJ0	657 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	KYAT3	Q6YP21	454 aa	Known RBP	11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	NYAP1	Q6ZVC0	841 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	SLFN11	Q7Z7L1	901 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	ARFGAP1	Q8N6T3	406 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	RTL3	Q8N8U3	475 aa	Known RBP	11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	OR2AP1	Q8NGE2	309 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	OR4C6	Q8NH72	309 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	PPP1R16A	Q96I34	528 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	EXOC2	Q96KP1	924 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	KLHL32	Q96NJ5	620 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	TRIM7	Q9C029	511 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	MAGEH1	Q9H213	219 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	TCEAL2	Q9H3H9	227 aa	Predicted RBP	11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	TMEM51	Q9NW97	253 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	GPATCH2L	Q9NWQ4	482 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	TMEM63C	Q9P1W3	806 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	FZD10	Q9ULW2	581 aa		11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235	TDRD6	O60522	2096 aa	Known RBP	11.4	□□□□□ -0.58
PCYT1A-215	ENST00000488235		A6NNZ2	444 aa		11.39	□□□□□ -0.59
PCYT1A-215	ENST00000488235	RASA4B	C9J798	803 aa		11.39	□□□□□ -0.59
PCYT1A-215	ENST00000488235	AREL1	O15033	823 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms