RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 TLR8Q9NR97 1041 aaKnown RBP4.41□□□□□ -1.7
SMC4-219ENST00000487747 HDAC6Q9UBN7 1215 aa4.41□□□□□ -1.7
SMC4-219ENST00000487747 A0A0U1RQJ8 604 aa4.4□□□□□ -1.71
SMC4-219ENST00000487747 CBX6O95503 412 aa4.4□□□□□ -1.71
SMC4-219ENST00000487747 CSF1P09603 554 aa4.4□□□□□ -1.71
SMC4-219ENST00000487747 SSTR2P30874 369 aa4.4□□□□□ -1.71
SMC4-219ENST00000487747 SERPINF1P36955 418 aa4.4□□□□□ -1.71
SMC4-219ENST00000487747 MVDP53602 400 aa4.4□□□□□ -1.71
SMC4-219ENST00000487747 ADORA2A-AS1P86434 159 aa4.4□□□□□ -1.71
SMC4-219ENST00000487747 AP5B1Q2VPB7 878 aa4.4□□□□□ -1.71
SMC4-219ENST00000487747 XKR9Q5GH70 373 aa4.4□□□□□ -1.71
SMC4-219ENST00000487747 EFHC1Q5JVL4 640 aa4.4□□□□□ -1.71
SMC4-219ENST00000487747 SYT13Q7L8C5 426 aa4.4□□□□□ -1.71
SMC4-219ENST00000487747 POC1AQ8NBT0 407 aa4.4□□□□□ -1.71
SMC4-219ENST00000487747 WDR6Q9NNW5 1121 aaKnown RBP4.4□□□□□ -1.71
SMC4-219ENST00000487747 ARFGAP3Q9NP61 516 aa4.4□□□□□ -1.71
SMC4-219ENST00000487747 TMEM51Q9NW97 253 aa4.4□□□□□ -1.71
SMC4-219ENST00000487747 GRHL1Q9NZI5 618 aa4.4□□□□□ -1.71
SMC4-219ENST00000487747 NDUFAF4Q9P032 175 aa4.4□□□□□ -1.71
SMC4-219ENST00000487747 SYT5O00445 386 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 XPNPEP2O43895 674 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 LMX1BO60663 402 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 CAND2O75155 1236 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 KRT18P05783 430 aaKnown RBP4.39□□□□□ -1.71
SMC4-219ENST00000487747 CD72P21854 359 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 SERPINB3P29508 390 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 SKIV2L2P42285 1042 aaKnown RBP4.39□□□□□ -1.71
SMC4-219ENST00000487747 MTNR1AP48039 350 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 BTKQ06187 659 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 ACSM2AQ08AH3 577 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 CAPSQ13938 189 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 RBM39Q14498 530 aaKnown RBP4.39□□□□□ -1.71
SMC4-219ENST00000487747 DSTYKQ6XUX3 929 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 PATL1Q86TB9 770 aaKnown RBP4.39□□□□□ -1.71
SMC4-219ENST00000487747 CCDC117Q8IWD4 279 aaPredicted RBP4.39□□□□□ -1.71
SMC4-219ENST00000487747 RASSF8Q8NHQ8 419 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 RFWD2Q8NHY2 731 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 STT3BQ8TCJ2 826 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 NEK9Q8TD19 979 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 SORCS1Q8WY21 1168 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 TRAPPC9Q96Q05 1148 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 NLRC4Q9NPP4 1024 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 CHST12Q9NRB3 414 aa4.39□□□□□ -1.71
SMC4-219ENST00000487747 FAM157AC9JC47 383 aa4.38□□□□□ -1.71
SMC4-219ENST00000487747 CHL1O00533 1208 aa4.38□□□□□ -1.71
SMC4-219ENST00000487747 ACKR2O00590 384 aa4.38□□□□□ -1.71
SMC4-219ENST00000487747 CCNT1O60563 726 aaKnown RBP4.38□□□□□ -1.71
SMC4-219ENST00000487747 HDAC1Q13547 482 aaPredicted RBP4.38□□□□□ -1.71
SMC4-219ENST00000487747 IL13RA2Q14627 380 aa4.38□□□□□ -1.71
SMC4-219ENST00000487747 FBXO43Q4G163 708 aa4.38□□□□□ -1.71
SMC4-219ENST00000487747 TMC8Q8IU68 726 aa4.38□□□□□ -1.71
SMC4-219ENST00000487747 CSGALNACT1Q8TDX6 532 aa4.38□□□□□ -1.71
SMC4-219ENST00000487747 BICD1Q96G01 975 aa4.38□□□□□ -1.71
SMC4-219ENST00000487747 WBP1Q96G27 269 aa4.38□□□□□ -1.71
SMC4-219ENST00000487747 WDR12Q9GZL7 423 aaKnown RBP4.38□□□□□ -1.71
SMC4-219ENST00000487747 LRFN1Q9P244 771 aa4.38□□□□□ -1.71
SMC4-219ENST00000487747 DHDHQ9UQ10 334 aa4.38□□□□□ -1.71
SMC4-219ENST00000487747 MAGEA13PA6NCF6 341 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 OR6C68A6NDL8 312 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 H0Y3Z8 333 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 CLGNO14967 610 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 CH25HO95992 272 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 TFRCP02786 760 aaKnown RBP4.37□□□□□ -1.71
SMC4-219ENST00000487747 MYL1P05976 194 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 YWHAQP27348 245 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 RPL3P39023 403 aaKnown RBP4.37□□□□□ -1.71
SMC4-219ENST00000487747 BYSLQ13895 437 aaKnown RBP4.37□□□□□ -1.71
SMC4-219ENST00000487747 LPIN1Q14693 890 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 PUM3Q15397 648 aaKnown RBP4.37□□□□□ -1.71
SMC4-219ENST00000487747 ME3Q16798 604 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 SH2D4BQ5SQS7 431 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 STPG1Q5TH74 334 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 FAM69BQ5VUD6 431 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 PGBD2Q6P3X8 592 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 C9orf139Q6ZV77 190 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 SETD9Q8NE22 299 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 TBC1D22AQ8WUA7 517 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 HES6Q96HZ4 224 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 ELAC2Q9BQ52 826 aaKnown RBP4.37□□□□□ -1.71
SMC4-219ENST00000487747 ADAM18Q9Y3Q7 739 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 NFS1Q9Y697 457 aa4.37□□□□□ -1.71
SMC4-219ENST00000487747 A0A096LPK6 155 aa4.36□□□□□ -1.71
SMC4-219ENST00000487747 STRNO43815 780 aa4.36□□□□□ -1.71
SMC4-219ENST00000487747 SKAP2O75563 359 aaPredicted RBP4.36□□□□□ -1.71
SMC4-219ENST00000487747 KRT38O76015 456 aa4.36□□□□□ -1.71
SMC4-219ENST00000487747 VNN2O95498 520 aa4.36□□□□□ -1.71
SMC4-219ENST00000487747 PAK4O96013 591 aaPredicted RBP4.36□□□□□ -1.71
SMC4-219ENST00000487747 FMO4P31512 558 aa4.36□□□□□ -1.71
SMC4-219ENST00000487747 BRWD1-AS2P59051 145 aa4.36□□□□□ -1.71
SMC4-219ENST00000487747 ARHGAP8P85298 464 aa4.36□□□□□ -1.71
SMC4-219ENST00000487747 SLC18A2Q05940 514 aa4.36□□□□□ -1.71
SMC4-219ENST00000487747 FAM27E3Q08E93 113 aa4.36□□□□□ -1.71
SMC4-219ENST00000487747 RPE65Q16518 533 aa4.36□□□□□ -1.71
SMC4-219ENST00000487747 NAGSQ8N159 534 aa4.36□□□□□ -1.71
SMC4-219ENST00000487747 GALNT15Q8N3T1 639 aa4.36□□□□□ -1.71
SMC4-219ENST00000487747 AADATQ8N5Z0 425 aa4.36□□□□□ -1.71
SMC4-219ENST00000487747 ANKRD44Q8N8A2 993 aa4.36□□□□□ -1.71
SMC4-219ENST00000487747 FSIP1Q8NA03 581 aa4.36□□□□□ -1.71
SMC4-219ENST00000487747 MCPH1Q8NEM0 835 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms