RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 FAM83HQ6ZRV2 1179 aaPredicted RBP4.29□□□□□ -1.72
TTC3-220ENST00000487711 ZNF367Q7RTV3 350 aa4.29□□□□□ -1.72
TTC3-220ENST00000487711 PRSS45Q7RTY3 260 aa4.29□□□□□ -1.72
TTC3-220ENST00000487711 MON1AQ86VX9 555 aa4.29□□□□□ -1.72
TTC3-220ENST00000487711 FBXL14Q8N1E6 418 aa4.29□□□□□ -1.72
TTC3-220ENST00000487711 CPXM2Q8N436 756 aa4.29□□□□□ -1.72
TTC3-220ENST00000487711 GDPD5Q8WTR4 605 aa4.29□□□□□ -1.72
TTC3-220ENST00000487711 NOC3LQ8WTT2 800 aaKnown RBP4.29□□□□□ -1.72
TTC3-220ENST00000487711 RUFY2Q8WXA3 655 aa4.29□□□□□ -1.72
TTC3-220ENST00000487711 EYA3Q99504 573 aa4.29□□□□□ -1.72
TTC3-220ENST00000487711 PHF7Q9BWX1 381 aaPredicted RBP4.29□□□□□ -1.72
TTC3-220ENST00000487711 DCLK3Q9C098 648 aa4.29□□□□□ -1.72
TTC3-220ENST00000487711 TMEM160Q9NX00 188 aa4.29□□□□□ -1.72
TTC3-220ENST00000487711 SAGE1Q9NXZ1 904 aa4.29□□□□□ -1.72
TTC3-220ENST00000487711 CNOT7Q9UIV1 285 aaKnown RBP4.29□□□□□ -1.72
TTC3-220ENST00000487711 SRPRBQ9Y5M8 271 aaKnown RBP4.29□□□□□ -1.72
TTC3-220ENST00000487711 TRIP12Q14669 1992 aaPredicted RBP4.28□□□□□ -1.72
TTC3-220ENST00000487711 C17orf113A0A1B0GUU1 675 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 ARHGAP10A1A4S6 786 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 PLEKHD1A6NEE1 506 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 INAFM1C9JVW0 142 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 NCAM2O15394 837 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 KCNAB3O43448 404 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 LDB2O43679 373 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 HOXD3P31249 432 aaPredicted RBP4.28□□□□□ -1.72
TTC3-220ENST00000487711 HOXA11P31270 313 aaPredicted RBP4.28□□□□□ -1.72
TTC3-220ENST00000487711 PSMC2P35998 433 aaKnown RBP4.28□□□□□ -1.72
TTC3-220ENST00000487711 THPOP40225 353 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 GPD2P43304 727 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 THBS3P49746 956 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 SLC18A2Q05940 514 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 TRPC3Q13507 836 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 UBAP2Q5T6F2 1119 aaKnown RBP4.28□□□□□ -1.72
TTC3-220ENST00000487711 ZNF517Q6ZMY9 492 aaPredicted RBP4.28□□□□□ -1.72
TTC3-220ENST00000487711 MON1BQ7L1V2 547 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 LRRC8DQ7L1W4 858 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.28□□□□□ -1.72
TTC3-220ENST00000487711 RBFAQ8N0V3 343 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 PRR26Q8N8Z3 221 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 MIGA1Q8NAN2 632 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 TMEM163Q8TC26 289 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 PPM1EQ8WY54 764 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 RNF183Q96D59 192 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 LYZL4Q96KX0 146 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 NTPCRQ9BSD7 190 aaKnown RBP4.28□□□□□ -1.72
TTC3-220ENST00000487711 TMEM204Q9BSN7 226 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 NPFFR1Q9GZQ6 430 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 MVB12BQ9H7P6 319 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 GGA3Q9NZ52 723 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 IL1RAPL1Q9NZN1 696 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 PCDHA7Q9UN72 937 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 PCDHGB5Q9Y5G0 923 aa4.28□□□□□ -1.72
TTC3-220ENST00000487711 LRRFIP2Q9Y608 721 aaKnown RBP4.28□□□□□ -1.72
TTC3-220ENST00000487711 TYW5A2RUC4 315 aaKnown RBP4.27□□□□□ -1.73
TTC3-220ENST00000487711 KDM4EB2RXH2 506 aaPredicted RBP4.27□□□□□ -1.73
TTC3-220ENST00000487711 NPHP1O15259 732 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 ASAP2O43150 1006 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 ITM2AO43736 263 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 PYGLP06737 847 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 T-ENOLP0DO92 83 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 CTPS1P17812 591 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 GNLYP22749 145 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 LIFRP42702 1097 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 CENPAP49450 140 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 PCYT1AP49585 367 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 BLKP51451 505 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 NANOS2P60321 138 aaKnown RBP4.27□□□□□ -1.73
TTC3-220ENST00000487711 VAMP2P63027 116 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 MAPK7Q13164 816 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 CAPSQ13938 189 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 ZNF284Q2VY69 593 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 C17orf99Q6UX52 265 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 MOB3CQ70IA8 216 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 TRILQ7L0X0 811 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 PATL1Q86TB9 770 aaKnown RBP4.27□□□□□ -1.73
TTC3-220ENST00000487711 LURAP1LQ8IV03 231 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 TEX45Q8NA69 505 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 ZMIZ2Q8NF64 920 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 TNIP2Q8NFZ5 429 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 B4GALNT2Q8NHY0 566 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 THOC3Q96J01 351 aaKnown RBP4.27□□□□□ -1.73
TTC3-220ENST00000487711 MARK4Q96L34 752 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 YME1L1Q96TA2 773 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 ZPBPQ9BS86 351 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 INTS2Q9H0H0 1204 aaKnown RBP4.27□□□□□ -1.73
TTC3-220ENST00000487711 HIPK2Q9H2X6 1198 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 SPATS2LQ9NUQ6 558 aaKnown RBP4.27□□□□□ -1.73
TTC3-220ENST00000487711 PEMTQ9UBM1 199 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 RAI2Q9Y5P3 530 aa4.27□□□□□ -1.73
TTC3-220ENST00000487711 IGKV2D-30A0A075B6S6 120 aa4.26□□□□□ -1.73
TTC3-220ENST00000487711 GOLGA6L10A0A0M3HER8 536 aa4.26□□□□□ -1.73
TTC3-220ENST00000487711 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.26□□□□□ -1.73
TTC3-220ENST00000487711 PABPN1LA6NDY0 278 aaKnown RBP4.26□□□□□ -1.73
TTC3-220ENST00000487711 LACTBL1A8MY62 500 aa4.26□□□□□ -1.73
TTC3-220ENST00000487711 HOXC11O43248 304 aaPredicted RBP4.26□□□□□ -1.73
TTC3-220ENST00000487711 SMAD6O43541 496 aaKnown RBP4.26□□□□□ -1.73
TTC3-220ENST00000487711 HOXC6P09630 235 aa4.26□□□□□ -1.73
TTC3-220ENST00000487711 HNRNPA1P09651 372 aaKnown RBP eCLIP4.26□□□□□ -1.73
TTC3-220ENST00000487711 TFPIP10646 304 aa4.26□□□□□ -1.73
TTC3-220ENST00000487711 NAGAP17050 411 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms