RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 PRPF39Q86UA1 669 aaKnown RBP14.41□□□□□ -0.1
CUX1-209ENST00000487284 HJURPQ8NCD3 748 aaPredicted RBP14.41□□□□□ -0.1
CUX1-209ENST00000487284 DCAKDQ8WVC6 231 aa14.41□□□□□ -0.1
CUX1-209ENST00000487284 SLC44A1Q8WWI5 657 aa14.41□□□□□ -0.1
CUX1-209ENST00000487284 BHMTQ93088 406 aa14.41□□□□□ -0.1
CUX1-209ENST00000487284 ASIC4Q96FT7 647 aa14.41□□□□□ -0.1
CUX1-209ENST00000487284 ZFYVE19Q96K21 471 aa14.41□□□□□ -0.1
CUX1-209ENST00000487284 KXD1Q9BQD3 176 aa14.41□□□□□ -0.1
CUX1-209ENST00000487284 PLA2G2FQ9BZM2 168 aa14.41□□□□□ -0.1
CUX1-209ENST00000487284 PDFQ9HBH1 243 aa14.41□□□□□ -0.1
CUX1-209ENST00000487284 SYBUQ9NX95 663 aa14.41□□□□□ -0.1
CUX1-209ENST00000487284 SENP1Q9P0U3 644 aa14.41□□□□□ -0.1
CUX1-209ENST00000487284 TBC1D14Q9P2M4 693 aa14.41□□□□□ -0.1
CUX1-209ENST00000487284 FAM159BA6NKW6 160 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 C2CD4DB7Z1M9 353 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 TBL1XO60907 577 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 NEBLO76041 1014 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 ALDH1A2O94788 518 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 HOXD9P28356 352 aaPredicted RBP14.4□□□□□ -0.1
CUX1-209ENST00000487284 ACVRL1P37023 503 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 MSH2P43246 934 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 NPY2RP49146 381 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 GNGT1P63211 74 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 CRADDP78560 199 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 GUCY1A3Q02108 690 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 GNA12Q03113 381 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 SLC10A7Q0GE19 358 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 SMAD2Q15796 467 aaKnown RBP14.4□□□□□ -0.1
CUX1-209ENST00000487284 LEXMQ3ZCV2 418 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 MARC1Q5VT66 337 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 TRIM68Q6AZZ1 485 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 SPATA22Q8NHS9 363 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 MAFAQ8NHW3 353 aaPredicted RBP14.4□□□□□ -0.1
CUX1-209ENST00000487284 DDI1Q8WTU0 396 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 OSCP1Q8WVF1 389 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 ELSPBP1Q96BH3 223 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 OTUB2Q96DC9 234 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 TMA16Q96EY4 203 aaKnown RBP14.4□□□□□ -0.1
CUX1-209ENST00000487284 ZNF599Q96NL3 588 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 SELENOSQ9BQE4 189 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 TRIM56Q9BRZ2 755 aaKnown RBP14.4□□□□□ -0.1
CUX1-209ENST00000487284 RPP25Q9BUL9 199 aaKnown RBP14.4□□□□□ -0.1
CUX1-209ENST00000487284 SLC25A51Q9H1U9 297 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 PRDM6Q9NQX0 595 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 DUS2Q9NX74 493 aaKnown RBP14.4□□□□□ -0.1
CUX1-209ENST00000487284 PLK2Q9NYY3 685 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 MOCS1Q9NZB8 636 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 BFARQ9NZS9 450 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 EPS15L1Q9UBC2 864 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 TBC1D30Q9Y2I9 924 aa14.4□□□□□ -0.1
CUX1-209ENST00000487284 ILVBLA1L0T0 632 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 FOXO6A8MYZ6 492 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 SLC9A3R1O14745 358 aaPredicted RBP14.39□□□□□ -0.11
CUX1-209ENST00000487284 ADRA1AP35348 466 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 TFF2Q03403 129 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 FCHO2Q0JRZ9 810 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 CDH17Q12864 832 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 GRM2Q14416 872 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 EML3Q32P44 896 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 LY6G5CQ5SRR4 150 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 TMCO4Q5TGY1 634 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 CASC4Q6P4E1 433 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 SETD3Q86TU7 594 aaPredicted RBP14.39□□□□□ -0.11
CUX1-209ENST00000487284 LRRC6Q86X45 466 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 TMEM25Q86YD3 366 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 MFSD6LQ8IWD5 586 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 SRRM1Q8IYB3 904 aaKnown RBP14.39□□□□□ -0.11
CUX1-209ENST00000487284 ADGRG2Q8IZP9 1017 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 OR52K2Q8NGK3 314 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 MZB1Q8WU39 189 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 NSMCE1Q8WV22 266 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 IRF7Q92985 503 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 E2F7Q96AV8 911 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 CENPTQ96BT3 561 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 IMP4Q96G21 291 aaKnown RBP14.39□□□□□ -0.11
CUX1-209ENST00000487284 SPHK2Q9NRA0 654 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 PIH1D1Q9NWS0 290 aaKnown RBP14.39□□□□□ -0.11
CUX1-209ENST00000487284 UBP1Q9NZI7 540 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 A0A0D9SEW6 157 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 TYW5A2RUC4 315 aaKnown RBP14.39□□□□□ -0.11
CUX1-209ENST00000487284 SRRM3A6NNA2 597 aaPredicted RBP14.39□□□□□ -0.11
CUX1-209ENST00000487284 ECI2O75521 394 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 PIAS1O75925 651 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 MT-CYBP00156 380 aaPredicted RBP14.39□□□□□ -0.11
CUX1-209ENST00000487284 ARSAP15289 507 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 CREB1P16220 341 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 PSMC3P17980 439 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 MPP3Q13368 585 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 HTR4Q13639 388 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 CRYMQ14894 314 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 MPPE1Q53F39 396 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 SPANXN3Q5MJ09 141 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 FYB2Q5VWT5 728 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 TTC19Q6DKK2 380 aaPredicted RBP14.39□□□□□ -0.11
CUX1-209ENST00000487284 PTCRAQ6ISU1 281 aaPredicted RBP14.39□□□□□ -0.11
CUX1-209ENST00000487284 TRMT10BQ6PF06 316 aaKnown RBP14.39□□□□□ -0.11
CUX1-209ENST00000487284 KDELC1Q6UW63 502 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 MTSS1LQ765P7 747 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 ZNF354CQ86Y25 554 aa14.39□□□□□ -0.11
CUX1-209ENST00000487284 KIAA1958Q8N8K9 716 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms