RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 MICALCLQ6ZW33 695 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 LCA5Q86VQ0 697 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 ZNF354CQ86Y25 554 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 HS6ST3Q8IZP7 471 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 C4orf33Q8N1A6 199 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 CFAP52Q8N1V2 620 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 PGBD5Q8N414 524 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 ANKRD42Q8N9B4 389 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 DCAF4L2Q8NA75 395 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 OR7D4Q8NG98 312 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 WBP2Q969T9 261 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 ACDQ96AP0 544 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 SERAC1Q96JX3 654 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 TGS1Q96RS0 853 aaKnown RBP11.78□□□□□ -0.52
PRKCB-207ENST00000486868 SLC22A12Q96S37 553 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 MCMBPQ9BTE3 642 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 ALG13Q9NP73 1137 aaKnown RBP11.78□□□□□ -0.52
PRKCB-207ENST00000486868 TREX1Q9NSU2 369 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 UBP1Q9NZI7 540 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 TXNDC16Q9P2K2 825 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 OR51B4Q9Y5P0 310 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 BRCA2P51587 3418 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 PTPRSQ13332 1948 aa11.78□□□□□ -0.52
PRKCB-207ENST00000486868 NUP205Q92621 2012 aa11.77□□□□□ -0.52
PRKCB-207ENST00000486868 HMX2A2RU54 273 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 EBAG9O00559 213 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 COPEO14579 308 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 ZNF197O14709 1029 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 TBL1XO60907 577 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 NDST3O95803 873 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 IL1BP01584 269 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 CKMP06732 381 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 ITGA2BP08514 1039 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 SPATA31D3P0C874 917 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 IRF1P10914 325 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 PYGBP11216 843 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 CA8P35219 290 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 RPA3P35244 121 aaPredicted RBP11.77□□□□□ -0.53
PRKCB-207ENST00000486868 ARCN1P48444 511 aaKnown RBP11.77□□□□□ -0.53
PRKCB-207ENST00000486868 CSNK1DP48730 415 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 LIMK2P53671 638 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 CYP4F8P98187 520 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 DSC2Q02487 901 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 ACVR1Q04771 509 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 CDK18Q07002 472 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 ITKQ08881 620 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 OLIG2Q13516 323 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 CAMK1Q14012 370 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 SEPT7Q16181 437 aaKnown RBP11.77□□□□□ -0.53
PRKCB-207ENST00000486868 GKAP1Q5VSY0 366 aaPredicted RBP11.77□□□□□ -0.53
PRKCB-207ENST00000486868 HHATQ5VTY9 493 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 KYAT3Q6YP21 454 aaKnown RBP11.77□□□□□ -0.53
PRKCB-207ENST00000486868 SPATA31D4Q6ZUB0 917 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 PIGWQ7Z7B1 504 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 CPLX4Q7Z7G2 160 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 KCNMB4Q86W47 210 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 RASSF3Q86WH2 238 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 TRIM42Q8IWZ5 723 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 MAB21L3Q8N8X9 362 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 TDRD5Q8NAT2 981 aaKnown RBP11.77□□□□□ -0.53
PRKCB-207ENST00000486868 FIBINQ8TAL6 211 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 CALML6Q8TD86 181 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 TCP10LQ8TDR4 215 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 ATP2A3Q93084 1043 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 OTUB2Q96DC9 234 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 MRRFQ96E11 262 aaKnown RBP11.77□□□□□ -0.53
PRKCB-207ENST00000486868 MFSD3Q96ES6 412 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 ALG14Q96F25 216 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 NUDCD1Q96RS6 583 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 CYP2S1Q96SQ9 504 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 RBBP8Q99708 897 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 SEMA3CQ99985 751 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 C19orf43Q9BQ61 176 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 PLCD4Q9BRC7 762 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 FAM167BQ9BTA0 163 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 CINPQ9BW66 212 aaPredicted RBP11.77□□□□□ -0.53
PRKCB-207ENST00000486868 SLC46A2Q9BY10 475 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 KIF9Q9HAQ2 790 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 CHRAC1Q9NRG0 131 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 SMPD4Q9NXE4 827 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 PLLPQ9Y342 182 aa11.77□□□□□ -0.53
PRKCB-207ENST00000486868 ATXN2Q99700 1313 aaKnown RBP11.77□□□□□ -0.53
PRKCB-207ENST00000486868 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.76□□□□□ -0.53
PRKCB-207ENST00000486868 A0A1W2PRU2 124 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 MROH6A6NGR9 719 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 H0Y626 953 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 LEFTY2O00292 366 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 KLF11O14901 512 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 CCL16O15467 120 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 INSIG1O15503 277 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 SLC7A4O43246 635 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 SPAG7O75391 227 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 MOSPD3O75425 235 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 CYBBP04839 570 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 MPOP05164 745 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 GSTA1P08263 222 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 ATXN1LP0C7T5 689 aaKnown RBP11.76□□□□□ -0.53
PRKCB-207ENST00000486868 MYL4P12829 197 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 TPH1P17752 444 aa11.76□□□□□ -0.53
PRKCB-207ENST00000486868 TAC1P20366 129 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms