RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 TFEBP19484 476 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 EPHB3P54753 998 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 C16orf89Q6UX73 402 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 LINGO4Q6UY18 593 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 PCDH20Q8N6Y1 951 aaKnown RBP13.39□□□□□ -0.27
HMGN1-216ENST00000486741 CYP2S1Q96SQ9 504 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 EFCAB1Q9HAE3 211 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 OLA1Q9NTK5 396 aaKnown RBP13.39□□□□□ -0.27
HMGN1-216ENST00000486741 GON4LQ3T8J9 2241 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 A0A0U1RQF3 1178 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 NR5A2O00482 541 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 TUFMP49411 452 aaKnown RBP13.39□□□□□ -0.27
HMGN1-216ENST00000486741 SEMA5AQ13591 1074 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 MAPRE2Q15555 327 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 SPRED3Q2MJR0 410 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 HECTD3Q5T447 861 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 ARHGAP36Q6ZRI8 547 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 OR7D4Q8NG98 312 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 CDRT15Q96T59 188 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 NPY6RQ99463 290 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 MID1IP1Q9NPA3 183 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 ADAM28Q9UKQ2 775 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 SLC45A1Q9Y2W3 748 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 RAG1P15918 1043 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 MPSTP25325 297 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 CRHR1P34998 444 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 BRMS1LQ5PSV4 323 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 FAM13CQ8NE31 585 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 NXNL1Q96CM4 212 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 DCUN1D1Q96GG9 259 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 NAF1Q96HR8 494 aaKnown RBP13.39□□□□□ -0.27
HMGN1-216ENST00000486741 EBF4Q9BQW3 602 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 GBA3Q9H227 469 aa13.39□□□□□ -0.27
HMGN1-216ENST00000486741 FARP1Q9Y4F1 1045 aaPredicted RBP13.39□□□□□ -0.27
HMGN1-216ENST00000486741 RREB1Q92766 1687 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 F8W810 466 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 ABLIM1O14639 778 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 UBDO15205 165 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 GATMP50440 423 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 RPL14P50914 215 aaKnown RBP13.38□□□□□ -0.27
HMGN1-216ENST00000486741 SMAD3P84022 425 aaKnown RBP13.38□□□□□ -0.27
HMGN1-216ENST00000486741 DDX39BQ13838 428 aaKnown RBP13.38□□□□□ -0.27
HMGN1-216ENST00000486741 RARS2Q5T160 578 aaKnown RBP13.38□□□□□ -0.27
HMGN1-216ENST00000486741 TRNP1Q6NT89 227 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 TRIML2Q8N7C3 387 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 HMCESQ96FZ2 354 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 TEKT5Q96M29 485 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 PHACTR1Q9C0D0 580 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 MLNP12872 115 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 CTPS1P17812 591 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 CRABP2P29373 138 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 MED21Q13503 144 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 LAMB3Q13751 1172 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 CAPRIN1Q14444 709 aaKnown RBP13.38□□□□□ -0.27
HMGN1-216ENST00000486741 THEMIS2Q5TEJ8 643 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 PKN3Q6P5Z2 889 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 LRRC8DQ7L1W4 858 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 ST13P4Q8IZP2 240 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-216ENST00000486741 ZSCAN18Q8TBC5 510 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-216ENST00000486741 SIGLEC10Q96LC7 697 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 CIPCQ9C0C6 399 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 COPG2Q9UBF2 871 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 SEPT3Q9UH03 358 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 DNMT3LQ9UJW3 386 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 BTN3A1O00481 513 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 PFKMP08237 780 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 HDCP19113 662 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 RAB10P61026 200 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 IRX1P78414 480 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-216ENST00000486741 ARHGEF7Q14155 803 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 LACTB2Q53H82 288 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-216ENST00000486741 IZUMO2Q6UXV1 221 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 TTC30BQ8N4P2 665 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 CXorf38Q8TB03 319 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 TBATAQ96M53 351 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 TTPALQ9BTX7 342 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 RNPEPL1Q9HAU8 725 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 SEMA4BQ9NPR2 832 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-216ENST00000486741 C15orf41Q9Y2V0 281 aa13.38□□□□□ -0.27
HMGN1-216ENST00000486741 HBS1LQ9Y450 684 aaKnown RBP13.38□□□□□ -0.27
HMGN1-216ENST00000486741 PLIN3O60664 434 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 BAIAP3O94812 1187 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 CDK7P50613 346 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 IRF9Q00978 393 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 ZBTB17Q13105 803 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 TMCO4Q5TGY1 634 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 BNC2Q6ZN30 1099 aaPredicted RBP13.37□□□□□ -0.27
HMGN1-216ENST00000486741 CDHR3Q6ZTQ4 885 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 INPP5DQ92835 1189 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 MRPL46Q9H2W6 279 aaKnown RBP13.37□□□□□ -0.27
HMGN1-216ENST00000486741 CYLDQ9NQC7 956 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 SLC4A7Q9Y6M7 1214 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 ADCY6O43306 1168 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 ZNF135P52742 658 aaPredicted RBP13.37□□□□□ -0.27
HMGN1-216ENST00000486741 CYP2R1Q6VVX0 501 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 ACMSDQ8TDX5 336 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 MOCOSQ96EN8 888 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 FTHL17Q9BXU8 183 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 ADGRE3Q9BY15 652 aa13.37□□□□□ -0.27
HMGN1-216ENST00000486741 TRIM54Q9BYV2 358 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms