RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 SLC7A4O43246 635 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 UBOX5O94941 541 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 UPP2O95045 317 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 DLDP09622 509 aaKnown RBP12.11□□□□□ -0.47
PKP4-213ENST00000486254 HOXB8P17481 243 aaPredicted RBP12.11□□□□□ -0.47
PKP4-213ENST00000486254 BGNP21810 368 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 ARNTP27540 789 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 KCNQ1P51787 676 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 PRKAA2P54646 552 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 HTRA3P83110 453 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 GNA12Q03113 381 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 ACVR1Q04771 509 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 PABPC1LQ4VXU2 614 aaKnown RBP12.11□□□□□ -0.47
PKP4-213ENST00000486254 ADGRF1Q5T601 910 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 N4BP2L1Q5TBK1 243 aaPredicted RBP12.11□□□□□ -0.47
PKP4-213ENST00000486254 LGI2Q8N0V4 545 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 C2CD4AQ8NCU7 369 aaPredicted RBP12.11□□□□□ -0.47
PKP4-213ENST00000486254 OR6Y1Q8NGX8 325 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 STON2Q8WXE9 905 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 PSKH2Q96QS6 385 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 APOL2Q9BQE5 337 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 KLF16Q9BXK1 252 aaPredicted RBP12.11□□□□□ -0.47
PKP4-213ENST00000486254 SLC13A1Q9BZW2 595 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 NACA2Q9H009 215 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 CYP4F11Q9HBI6 524 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 NT5MQ9NPB1 228 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 SAR1AQ9NR31 198 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 SEPT3Q9UH03 358 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 MAGED2Q9UNF1 606 aaPredicted RBP12.11□□□□□ -0.47
PKP4-213ENST00000486254 INSL5Q9Y5Q6 135 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 MRPL42Q9Y6G3 142 aaKnown RBP12.11□□□□□ -0.47
PKP4-213ENST00000486254 CAPN7Q9Y6W3 813 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 DENND4CQ5VZ89 1909 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 MROH6A6NGR9 719 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 ANKRD65E5RJM6 399 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 H0YHG0 523 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 GFRA2O00451 464 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 LILRB3O75022 631 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 PMPCBO75439 489 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 UNC5CO95185 931 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 SERPINE1P05121 402 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 RPL17P18621 184 aaKnown RBP12.1□□□□□ -0.47
PKP4-213ENST00000486254 PSMA3P25788 255 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 SLC6A4P31645 630 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 EPHB3P54753 998 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 TMPRSS15P98073 1019 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 NSUN2Q08J23 767 aaKnown RBP eCLIP12.1□□□□□ -0.47
PKP4-213ENST00000486254 BST1Q10588 318 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 RALGPS1Q5JS13 557 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 MBLAC2Q68D91 279 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 CES3Q6UWW8 571 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 RTL10Q7L3V2 364 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 FAM217AQ8IXS0 508 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 MICALL1Q8N3F8 863 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 TMEM199Q8N511 208 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 PABPC5Q96DU9 382 aaKnown RBP12.1□□□□□ -0.47
PKP4-213ENST00000486254 AGAP2Q99490 1192 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 TUBB6Q9BUF5 446 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 ACE2Q9BYF1 805 aaPredicted RBP12.1□□□□□ -0.47
PKP4-213ENST00000486254 MRPL17Q9NRX2 175 aaKnown RBP12.1□□□□□ -0.47
PKP4-213ENST00000486254 SLC17A6Q9P2U8 582 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 COPG2Q9UBF2 871 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 CORO1CQ9ULV4 474 aaPredicted RBP12.1□□□□□ -0.47
PKP4-213ENST00000486254 CHKBQ9Y259 395 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 ARIH1Q9Y4X5 557 aaPredicted RBP12.1□□□□□ -0.47
PKP4-213ENST00000486254 PTPRSQ13332 1948 aa12.1□□□□□ -0.47
PKP4-213ENST00000486254 TRAFD1O14545 582 aaPredicted RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 KDELR3O43731 214 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 RASSF9O75901 435 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 SNUPNO95149 360 aaKnown RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 C1RP00736 705 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 PRKCGP05129 697 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 ATXN1LP0C7T5 689 aaKnown RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 NEFHP12036 1026 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 TPH1P17752 444 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 CRABP2P29373 138 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 ELF1P32519 619 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 CD86P42081 329 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 NCALDP61601 193 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 ZNF235Q14590 738 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 POU6F1Q14863 301 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 PCLAFQ15004 111 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 CHI3L2Q15782 390 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 TAF1BQ53T94 588 aaPredicted RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 SPOUT1Q5T280 376 aaKnown RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 TSTD2Q5T7W7 516 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 HERC6Q8IVU3 1022 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 DIS3LQ8TF46 1054 aaKnown RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 SREK1Q8WXA9 508 aaKnown RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 INPP5DQ92835 1189 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 PRICKLE1Q96MT3 831 aaPredicted RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 C12orf65Q9H3J6 166 aaKnown RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 NPHS2Q9NP85 383 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 IARS2Q9NSE4 1012 aaKnown RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 A0A096LPK6 155 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 WDR91A4D1P6 747 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 GJB5O95377 273 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 F11P03951 625 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 C2P06681 752 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 HMBSP08397 361 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms