RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 DPY19L3Q6ZPD9 716 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 B4GALNT4Q76KP1 1039 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 MMAAQ8IVH4 418 aaKnown RBP11.56□□□□□ -0.56
NUP50-216ENST00000486184 PLPP6Q8IY26 295 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 MDGA1Q8NFP4 955 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 OR2A12Q8NGT7 310 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 OR6K2Q8NGY2 324 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 GRIN3AQ8TCU5 1115 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 HTR3CQ8WXA8 447 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 PSKH2Q96QS6 385 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 FAM118BQ9BPY3 351 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 FAM126AQ9BYI3 521 aaPredicted RBP11.56□□□□□ -0.56
NUP50-216ENST00000486184 TPSD1Q9BZJ3 242 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 POLR1EQ9GZS1 481 aaKnown RBP11.56□□□□□ -0.56
NUP50-216ENST00000486184 RSPH9Q9H1X1 276 aaPredicted RBP11.56□□□□□ -0.56
NUP50-216ENST00000486184 SCUBE2Q9NQ36 999 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 RBM22Q9NW64 420 aaKnown RBP eCLIP11.56□□□□□ -0.56
NUP50-216ENST00000486184 LHX3Q9UBR4 397 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 AMACRQ9UHK6 382 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 SCML1Q9UN30 329 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 NCKAP1Q9Y2A7 1128 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 SAR1BQ9Y6B6 198 aa11.56□□□□□ -0.56
NUP50-216ENST00000486184 ZNF318Q5VUA4 2279 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 TCRBV7S2A1N4TA0A589 114 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 CFAP69A5D8W1 941 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 K7ESF4 209 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 KPNA3O00505 521 aaPredicted RBP11.55□□□□□ -0.56
NUP50-216ENST00000486184 AXIN1O15169 862 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 JCHAINP01591 159 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 TUBB4AP04350 444 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 PRLRP16471 622 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 PXNP49023 591 aaPredicted RBP11.55□□□□□ -0.56
NUP50-216ENST00000486184 SCNN1BP51168 640 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 COPAP53621 1224 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 AP1S1P61966 158 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 IFI35P80217 286 aaPredicted RBP11.55□□□□□ -0.56
NUP50-216ENST00000486184 ZBTB16Q05516 673 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 NSUN2Q08J23 767 aaKnown RBP eCLIP11.55□□□□□ -0.56
NUP50-216ENST00000486184 CCDC15Q0P6D6 951 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 CST6Q15828 149 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 MYLK3Q32MK0 819 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 SRLQ86TD4 932 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 ZSCAN30Q86W11 494 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 RASSF3Q86WH2 238 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 TSEN2Q8NCE0 465 aaKnown RBP11.55□□□□□ -0.56
NUP50-216ENST00000486184 TMIEQ8NEW7 156 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 PIP4K2CQ8TBX8 421 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 MAML1Q92585 1016 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 ZNF592Q92610 1267 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 LRIG1Q96JA1 1093 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 SPACA7Q96KW9 195 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 MRGPRX1Q96LB2 322 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 VAT1Q99536 393 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 OMDQ99983 421 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 OSBPL1AQ9BXW6 950 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 MKRN2Q9H000 416 aaKnown RBP11.55□□□□□ -0.56
NUP50-216ENST00000486184 ATP13A3Q9H7F0 1226 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 HOMER3Q9NSC5 361 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.55□□□□□ -0.56
NUP50-216ENST00000486184 KLHL8Q9P2G9 620 aaPredicted RBP11.55□□□□□ -0.56
NUP50-216ENST00000486184 EBF1Q9UH73 591 aa11.55□□□□□ -0.56
NUP50-216ENST00000486184 EVLQ9UI08 416 aaPredicted RBP11.55□□□□□ -0.56
NUP50-216ENST00000486184 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.54□□□□□ -0.56
NUP50-216ENST00000486184 RNF103O00237 685 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 KCNN4O15554 427 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 ZNF217O75362 1048 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 ZNF821O75541 412 aaPredicted RBP11.54□□□□□ -0.56
NUP50-216ENST00000486184 LEFTY1O75610 366 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 PEX11BO96011 259 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 HLA-DQB2P05538 268 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 C5AR1P21730 350 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 CA4P22748 312 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 CES1P23141 567 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 RBL1P28749 1068 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 SERPINA4P29622 427 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 HOXA6P31267 233 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 SLC8A1P32418 973 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 ACTN2P35609 894 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 PAFAH1B1P43034 410 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 CSNK1DP48730 415 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 FNTBP49356 437 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 MAXP61244 160 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 RPS14P62263 151 aaKnown RBP11.54□□□□□ -0.56
NUP50-216ENST00000486184 BCL2L1Q07817 233 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 ZBTB17Q13105 803 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 SNX1Q13596 522 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 ZNF528Q3MIS6 628 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 USP39Q53GS9 565 aaKnown RBP11.54□□□□□ -0.56
NUP50-216ENST00000486184 ARSIQ5FYB1 569 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 RALGPS1Q5JS13 557 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 PAPD7Q5XG87 772 aaKnown RBP11.54□□□□□ -0.56
NUP50-216ENST00000486184 ITPRIPL1Q6GPH6 555 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 NYAP1Q6ZVC0 841 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 KBTBD6Q86V97 674 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 LONP2Q86WA8 852 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 RASGEF1CQ8N431 466 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.54□□□□□ -0.56
NUP50-216ENST00000486184 TEX26Q8N6G2 289 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 CHST14Q8NCH0 376 aa11.54□□□□□ -0.56
NUP50-216ENST00000486184 ACTRT1Q8TDG2 376 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms