RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 GANCQ8TET4 914 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 ADAMTS14Q8WXS8 1223 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 IGSF8Q969P0 613 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 C18orf8Q96DM3 657 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 NCAPGQ9BPX3 1015 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 SLC4A5Q9BY07 1137 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 FUT8Q9BYC5 575 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 FAM129AQ9BZQ8 928 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 RAB17Q9H0T7 212 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 RSPH9Q9H1X1 276 aaPredicted RBP9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 PABPC3Q9H361 631 aaKnown RBP9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 GOLPH3Q9H4A6 298 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 ANLNQ9NQW6 1124 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 GDF3Q9NR23 364 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 FBXL12Q9NXK8 326 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 COX16Q9P0S2 106 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 TLR6Q9Y2C9 796 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 ADAMTS20P59510 1910 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 TCRBV5S1A1TA0A578 114 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 SIGLEC16A6NMB1 481 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 TMEM110-MUSTN1A8MSY1 372 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 IRAK2O43187 625 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 SART1O43290 800 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 MAP3K7O43318 606 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 TRUB2O95900 331 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 IGLV3-25P01717 112 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 ATP5BP06576 529 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 PDGFRAP16234 1089 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 TFE3P19532 575 aaPredicted RBP9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 PSMD8P48556 350 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 COPS2P61201 443 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 EIF4EBP2Q13542 120 aaPredicted RBP9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 CYP1B1Q16678 543 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 ZNF423Q2M1K9 1284 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 HNRNPA1L2Q32P51 320 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 POM121L1PQ3SYA9 428 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 MPP7Q5T2T1 576 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 ZNF776Q68DI1 518 aaPredicted RBP9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 KIAA0895LQ68EN5 471 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 DCUN1D2Q6PH85 259 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 NCEH1Q6PIU2 408 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 SLC13A5Q86YT5 568 aaPredicted RBP9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 ZDHHC17Q8IUH5 632 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 KATNAL2Q8IYT4 538 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 DEFB106AQ8N104 65 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 EXD1Q8NHP7 514 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 AENQ8WTP8 325 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 STK32AQ8WU08 396 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 ALG3Q92685 438 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 PTPRN2Q92932 1015 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 CAVIN3Q969G5 261 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 AZIN2Q96A70 460 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 CPXM1Q96SM3 734 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 KRT12Q99456 494 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 PRMT1Q99873 361 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 ZDHHC5Q9C0B5 715 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 TMPRSS4Q9NRS4 437 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 DDX56Q9NY93 547 aaKnown RBP9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 SUN2Q9UH99 717 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 FEZ2Q9UHY8 353 aaPredicted RBP9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 SARDHQ9UL12 918 aa9.61□□□□□ -0.87
TMEM39A-208ENST00000486159 C10orf142B7Z368 130 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 BHMG1C9JSJ3 638 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 H0Y626 953 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 I6L893 689 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 CAPN9O14815 690 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 PHF2O75151 1096 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 RNASEH2AO75792 299 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 DKK1O94907 266 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 FBXO21O94952 628 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 HEXIM1O94992 359 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 TRIM16O95361 564 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 CER1O95813 267 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 ERBB2P04626 1255 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 DESP17661 470 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 CD27P26842 260 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 SLC8A1P32418 973 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 PTPN7P35236 360 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 SCNN1AP37088 669 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 CTSKP43235 329 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 FNTAP49354 379 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 AFF3P51826 1226 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 DRG2P55039 364 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 PPP2CBP62714 309 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 PPP2CAP67775 309 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 PDCLQ13371 301 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 CDH18Q13634 790 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 CST6Q15828 149 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 OTUD1Q5VV17 481 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 FAM183BPQ6ZVS7 135 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 SYDE1Q6ZW31 735 aaPredicted RBP9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 POLNQ7Z5Q5 900 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 GLRX5Q86SX6 157 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 TMEM110Q86TL2 294 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 CHSY1Q86X52 802 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 PROSER1Q86XN7 944 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 RCOR2Q8IZ40 523 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 C1orf131Q8NDD1 294 aaKnown RBP9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 SEC14L1Q92503 715 aa9.6□□□□□ -0.87
TMEM39A-208ENST00000486159 SLCO2A1Q92959 643 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms